Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p29210 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_228.3550 Anthoceros agrestis
Actinidia09744 Actinidia chinensis
Actinidia11683 Actinidia chinensis
Actinidia22171 Actinidia chinensis
Ah.07g197550 Amaranthus hybridus
Ah.12g052650 Amaranthus hybridus
AL6G45030 Arabidopsis lyrata
Aqoxy5G04291 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DK6PZW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MN1JRI Arachis hypogaea
AT4G10930 Arabidopsis thaliana
ATR0602G083 Amborella trichopoda
Atru.chr9.1963 Acer truncatum
AUR62010858 Chenopodium quinoa
AUR62019856 Chenopodium quinoa
BcaB01g02727 Brassica carinata
BcaB04g17245 Brassica carinata
BcaC01g04650 Brassica carinata
BolC3t15840H Brassica oleracea
BraA03t12116Z Brassica rapa
C03p35290 Brassica napus
CAN.G390.10 Capsicum annuum
CANSAT21G0687 Cannabis sativa
CARHR255670 Cardamine hirsuta
Carub.0006s2968 Capsella rubella
Ca_17472_v3 Cicer arietinum L.
CBR_g31499 Chara braunii
Cc08_g16230 Coffea canephora
Cfa011987 Carpinus fangiana
Ciclev10018527m.g Citrus clementina
CiPaw.12G081600 Carya illinoinensis
ClCG01G001730 Citrullus lanatus
COL.COLO4_10720 Corchorus olitorius
Cpa.g.sc571.3 Carica papaya
Cpa.g.sc79.13 Carica papaya
CsaV3_5G001870 Cucumis sativus L.
CSS0021468 Camellia sinensis var. sinensis
DCAR_029909 Daucus carota
Dinv38822 Davidia involucrata
Duzib084G0652 Durio zibethinus
Duzib205G1781 Durio zibethinus
ECA233G0648 Erigeron canadensis
EL10Ac5g12933 Beta vulgaris
Eucgr.E00880 Eucalyptus grandis
FAN04G2854 Fragaria x ananassa
FAN18G0793 Fragaria x ananassa
FAN18G3678 Fragaria x ananassa
FvH4_5g04850 Fragaria vesca
Glyma.05G217800 Glycine max
Glyma.08G023800 Glycine max
Glyma.09G147000 Glycine max
Gohir.A08G112400 Gossypium hirsutum
Gohir.D08G125400 Gossypium hirsutum
Gorai.004G132300 Gossypium raimondii
GSVIVG01019556001 Vitis vinifera
HanXRQChr10g0316931 Helianthus annuus
Haze_09085 Corylus avellana
Hma1.2p1_0359F.1_g135140 Hydrangea macrophylla
HPP92_009829 Vanilla planifolia
HPP92_009830 Vanilla planifolia
HPP92_009839 Vanilla planifolia
Hund11381 Selenicereus undatus
Hund14211 Selenicereus undatus
Lalb_Chr05g0224031 Lupinus albus
Lj2A165T43 Lonicera japonica
Lj4g0024036 Lotus japonicus
Lsat_1_v5_gn_6_8380 Lactuca sativa
Manes.01G050200 Manihot esculenta
Mapoly0002s0107 Marchantia polymorpha
MBI07_g39841_MAGBIO Magnolia biondii
MCO05G172 Micromonas commoda
MD06G1109300 Malus domestica
MD12G1080900 Malus domestica
MD14G1130300 Malus domestica
Medtr8g099585 Medicago truncatula
MELO3C005765.2 Cucumis melo
Migut.E01259 Erythranthe guttata
MSTRG.1801 Avicennia marina
Nitab4.5_0004010g0010 Nicotiana tabacum
Nitab4.5_0004515g0030 Nicotiana tabacum
Nitab4.5_0004515g0060 Nicotiana tabacum
Nn1g00246 Nelumbo nucifera
Oeu009974.1 Olea europaea
Oeu009975.1 Olea europaea
Oeu023154.1 Olea europaea
Os12g0209700 Oryza sativa ssp. japonica
Peaxi162Scf00117g00919 Petunia axillaris
PGR042G3794 Punica granatum
Phvul.002G299600 Phaseolus vulgaris
Potri.001G089900 Populus trichocarpa
Pp3c6_15100 Physcomitrium patens
Prupe.5G122300 Prunus persica
Psat4g095080 Pisum sativum
Psat7g023280 Pisum sativum
PSO170G1024 Papaver somniferum
QL02p030088 Quercus lobata
QL02p030100 Quercus lobata
RcHm_v2.0_Chr7g0194241 Rosa chinensis
Rhsim02G0245100 Rhododendron simsii
RhsimUnG0007600 Rhododendron simsii
Sabra01G0066300 Salix brachista
Sc22g0004920 Simmondsia chinensis
Sc22g0004930 Simmondsia chinensis
Sed0008879 Sechium edule
SEGI_16880 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31401 Striga asiatica
SGA_v2.0_scaffold130G34351 Striga asiatica
SGA_v2.0_scaffold408G51088 Striga asiatica
SGA_v2.0_scaffold49G18107 Striga asiatica
SHI06968 Sapria himalayana
SHI06970 Sapria himalayana
SHI06971 Sapria himalayana
SHI06972 Sapria himalayana
SHI06973 Sapria himalayana
Solyc12g055910.3 Solanum lycopersicum
Sopen12g024380 Solanum pennellii
Sp6g06550 Schrenkiella parvula
TAR375G1078 Trochodendron aralioides
THA.LOC104807002 Tarenaya hassleriana
Thecc.03G300300 Theobroma cacao
Thhalv10028398m.g Eutrema salsugineum
TPR.G3389 Trifolium pratense
TPR.G40773 Trifolium pratense
TPR.G5178 Trifolium pratense
TWI60G1065 Tripterygium wilfordii
TWI81G0375 Tripterygium wilfordii
unitig_26.g9566 Utricularia gibba
vmacro11345 Vaccinium macrocarpon
VMungo0251G1998 Vigna mungo
Zm00001eb209080 Zea mays

User provided reference genes

Program Settings