Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p09780 Brassica napus
A10p12490 Brassica napus
Aa31LG3G11210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis
Actinidia35369 Actinidia chinensis
Ah.06g182250 Amaranthus hybridus
AL8G30770 Arabidopsis lyrata
Aqoxy1G02863 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea
AT5G55220 Arabidopsis thaliana
ATR1128G029 Amborella trichopoda
Atru.chr2.3529 Acer truncatum
Atru.chr2.3549 Acer truncatum
AUR62015881 Chenopodium quinoa
AUR62020342 Chenopodium quinoa
BcaB05g22192 Brassica carinata
BcaC03g14251 Brassica carinata
BcaC03g14252 Brassica carinata
BcaC04g20257 Brassica carinata
BolC2t07733H Brassica oleracea
BolC9t57451H Brassica oleracea
BolC9t57452H Brassica oleracea
BraA02t06043Z Brassica rapa
BraA10t43342Z Brassica rapa
C02p16310 Brassica napus
C09p45760 Brassica napus
C09p45770 Brassica napus
CAN.G152.11 Capsicum annuum
CAN.G337.58 Capsicum annuum
CANSAT11G1049 Cannabis sativa
CARHR268580 Cardamine hirsuta
Carub.0008s1557 Capsella rubella
Ca_06346_v3 Cicer arietinum L.
Ca_29171_v3 Cicer arietinum L.
CBR_g21850 Chara braunii
Cc05_g14300 Coffea canephora
CDE04G0522 Ceratophyllum demersum
CDE04G2936 Ceratophyllum demersum
Ciclev10007944m.g Citrus clementina
CiPaw.11G172700 Carya illinoinensis
ClCG10G005120 Citrullus lanatus
COL.COLO4_09733 Corchorus olitorius
Cpa.g.sc284.5 Carica papaya
Cre01.g001750 Chlamydomonas reinhardtii
CsaV3_3G004800 Cucumis sativus L.
CSS0000535 Camellia sinensis var. sinensis
CSS0042888 Camellia sinensis var. sinensis
DCAR_017106 Daucus carota
Dinv22232 Davidia involucrata
Duzib213G0195 Durio zibethinus
ECA240G2757 Erigeron canadensis
EL10Ac4g07692 Beta vulgaris
Eucgr.F03504 Eucalyptus grandis
FAN11G0939 Fragaria x ananassa
FAN16G2690 Fragaria x ananassa
FAN21G2609 Fragaria x ananassa
FAN25G1378 Fragaria x ananassa
FAN25G3210 Fragaria x ananassa
FvH4_3g23540 Fragaria vesca
Glyma.02G294900 Glycine max
Glyma.14G018700 Glycine max
Glyma.14G020666 Glycine max
Glyma.14G020800 Glycine max
Gohir.A01G084500 Gossypium hirsutum
Gohir.D01G070900 Gossypium hirsutum
Gorai.002G093600 Gossypium raimondii
GSVIVG01037722001 Vitis vinifera
HanXRQChr03g0076861 Helianthus annuus
HanXRQChr13g0408251 Helianthus annuus
Haze_09462 Corylus avellana
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla
HPP92_015779 Vanilla planifolia
Hund01957 Selenicereus undatus
Lalb_Chr04g0248161 Lupinus albus
Lj1C880T10 Lonicera japonica
LjContig00272g0018197 Lotus japonicus
Lsat_1_v5_gn_9_90660 Lactuca sativa
Manes.03G136600 Manihot esculenta
Mapoly0157s0020 Marchantia polymorpha
MBI19_g29437_MAGBIO Magnolia biondii
MCO13G367 Micromonas commoda
MD11G1209500 Malus domestica
Medtr5g093830 Medicago truncatula
MELO3C014178.2 Cucumis melo
Migut.M01708 Erythranthe guttata
Nitab4.5_0000984g0040 Nicotiana tabacum
Nitab4.5_0002826g0040 Nicotiana tabacum
Nn1g07344 Nelumbo nucifera
Oeu026379.1 Olea europaea
Oeu026380.1 Olea europaea
Os06g0308000 Oryza sativa ssp. japonica
Peaxi162Scf00235g00727 Petunia axillaris
PGR031G3909 Punica granatum
PGSC0003DMG400022300 Solanum tuberosum
Phvul.008G272400 Phaseolus vulgaris
Potri.015G065900 Populus trichocarpa
Pp3c11_10950 Physcomitrium patens
Pp3c2_30270 Physcomitrium patens
PRCOL_00002693 Prasinoderma coloniale
Prupe.4G223000 Prunus persica
Psat2g009800 Pisum sativum
PSO541G6030 Papaver somniferum
PSO675G6628 Papaver somniferum
QL08p020269 Quercus lobata
RcHm_v2.0_Chr5g0041541 Rosa chinensis
Rhsim04G0016400 Rhododendron simsii
Sabra15G0091100 Salix brachista
SalBow8G4839 Salvia bowleyana
Sc16g0005740 Simmondsia chinensis
Sed0026759 Sechium edule
SEGI_28230 Sequoiadendron giganteum
SGA_v2.0_scaffold171G38908 Striga asiatica
SMO361G0007 Selaginella moellendorffii
Solyc07g064950.3 Solanum lycopersicum
Sopen07g033150 Solanum pennellii
Sp6g17150 Schrenkiella parvula
TAR629G1914 Trochodendron aralioides
TAR720G0004 Trochodendron aralioides
THA.LOC104817684 Tarenaya hassleriana
Thecc.07G028300 Theobroma cacao
Thhalv10013195m.g Eutrema salsugineum
TPR.G35353 Trifolium pratense
TWI39G1205 Tripterygium wilfordii
unitig_22.g6169 Utricularia gibba
unitig_22.g6170 Utricularia gibba
vmacro09689 Vaccinium macrocarpon
VMungo0464G1494 Vigna mungo
VMungo0647G0128 Vigna mungo
VMungo0647G0792 Vigna mungo
Zm00001eb405570 Zea mays

User provided reference genes

Program Settings