Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p08930 Brassica napus
Aa31LG2G1810 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.450 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.453 Anthoceros agrestis
Actinidia34731 Actinidia chinensis
Ah.06g186820 Amaranthus hybridus
AL1G64680 Arabidopsis lyrata
Aqoxy1G00667 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BN00BV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WX42FR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea
AT2G26230 Arabidopsis thaliana
ATR0772G096 Amborella trichopoda
Atru.chr12.1071 Acer truncatum
AUR62034169 Chenopodium quinoa
AUR62034490 Chenopodium quinoa
BcaB06g26497 Brassica carinata
BcaC06g35533 Brassica carinata
BolC7t41872H Brassica oleracea
BraA07t28684Z Brassica rapa
C07p13770 Brassica napus
CAN.G143.25 Capsicum annuum
CANSAT56G4342 Cannabis sativa
CARHR103400 Cardamine hirsuta
Carub.0002s0907 Capsella rubella
Ca_12272_v3 Cicer arietinum L.
CBR_g20325 Chara braunii
Cc02_g09390 Coffea canephora
CDE02G2990 Ceratophyllum demersum
Cfa010524 Carpinus fangiana
Ciclev10016037m.g Citrus clementina
CiPaw.13G043500 Carya illinoinensis
ClCG05G021930 Citrullus lanatus
COL.COLO4_07822 Corchorus olitorius
Cpa.g.sc54.21 Carica papaya
Cre12.g504950 Chlamydomonas reinhardtii
CsaV3_5G035210 Cucumis sativus L.
CSS0004952 Camellia sinensis var. sinensis
CSS0009212 Camellia sinensis var. sinensis
CSS0019594 Camellia sinensis var. sinensis
CSS0030296 Camellia sinensis var. sinensis
CSS0043702 Camellia sinensis var. sinensis
DCAR_004552 Daucus carota
Dinv08587 Davidia involucrata
Duzib106G1265 Durio zibethinus
ECA238G1473 Erigeron canadensis
EL10Ac4g08718 Beta vulgaris
Eucgr.J00283 Eucalyptus grandis
Eucgr.J00287 Eucalyptus grandis
FAN01G0562 Fragaria x ananassa
FAN01G2803 Fragaria x ananassa
FAN03G1346 Fragaria x ananassa
FAN10G2047 Fragaria x ananassa
FvH4_7g03231 Fragaria vesca
Glyma.10G121524 Glycine max
Glyma.20G072400 Glycine max
Gohir.A05G398800 Gossypium hirsutum
Gohir.D04G017100 Gossypium hirsutum
Gorai.012G019800 Gossypium raimondii
GSVIVG01034634001 Vitis vinifera
HanXRQChr02g0053551 Helianthus annuus
Haze_03464 Corylus avellana
Hma1.2p1_0381F.1_g139970 Hydrangea macrophylla
Hma1.2p1_0381F.1_g139980 Hydrangea macrophylla
Hma1.2p1_0381F.1_g139990 Hydrangea macrophylla
HPP92_027461 Vanilla planifolia
Hund06805 Selenicereus undatus
Lalb_Chr19g0128951 Lupinus albus
Lj3A923T60 Lonicera japonica
Lj6g0008960 Lotus japonicus
Lsat_1_v5_gn_2_105841 Lactuca sativa
Manes.10G059900 Manihot esculenta
Mapoly0079s0008 Marchantia polymorpha
MCO08G151 Micromonas commoda
MD02G1258600 Malus domestica
MD07G1062200 Malus domestica
Medtr1g048370 Medicago truncatula
MELO3C012335.2 Cucumis melo
Migut.F00847 Erythranthe guttata
MSTRG.9035 Avicennia marina
Nitab4.5_0001781g0180 Nicotiana tabacum
Nitab4.5_0007799g0030 Nicotiana tabacum
Nn2g14297 Nelumbo nucifera
Nn6g34699 Nelumbo nucifera
Oeu009248.1 Olea europaea
Os01g0865100 Oryza sativa ssp. japonica
Peaxi162Scf00725g00522 Petunia axillaris
PGR044G0766 Punica granatum
PGSC0003DMG401001978 Solanum tuberosum
Phvul.007G234300 Phaseolus vulgaris
Potri.010G242600 Populus trichocarpa
Pp3c14_15560 Physcomitrium patens
PRCOL_00005817 Prasinoderma coloniale
Prupe.2G072000 Prunus persica
Psat6g049120 Pisum sativum
Psat6g049160 Pisum sativum
PSO339G6589 Papaver somniferum
PSO384G0865 Papaver somniferum
QL04p047894 Quercus lobata
RcHm_v2.0_Chr1g0325281 Rosa chinensis
RcHm_v2.0_Chr1g0325311 Rosa chinensis
Rhsim09G0141100 Rhododendron simsii
Sabra10G0189600 Salix brachista
SalBow3G1532 Salvia bowleyana
Sc09g0005130 Simmondsia chinensis
Sed0014972 Sechium edule
SEGI_29992 Sequoiadendron giganteum
SEGI_30163 Sequoiadendron giganteum
SEGI_30780 Sequoiadendron giganteum
SEGI_33218 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01315 Striga asiatica
SMO134G0227 Selaginella moellendorffii
Solyc11g006550.3 Solanum lycopersicum
Sopen11g002450 Solanum pennellii
Sp3g21150 Schrenkiella parvula
SpUn0047_0030 Schrenkiella parvula
TAR623G0250 Trochodendron aralioides
THA.LOC104801755 Tarenaya hassleriana
THA.LOC104804947 Tarenaya hassleriana
THA.LOC104823771 Tarenaya hassleriana
Thecc.10G116100 Theobroma cacao
Thhalv10021194m.g Eutrema salsugineum
TPR.G19796 Trifolium pratense
TWI38G2380 Tripterygium wilfordii
unitig_899.g14460 Utricularia gibba
vmacro10321 Vaccinium macrocarpon
VMungo0720G2948 Vigna mungo
Zm00001eb146880 Zea mays

User provided reference genes

Program Settings