Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44610 Brassica napus
Aa31LG8G11520 Aethionema arabicum
Aa31LG8G11530 Aethionema arabicum
Aa31LG8G11540 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis
Actinidia07868 Actinidia chinensis
Actinidia18833 Actinidia chinensis
Ah.01g002640 Amaranthus hybridus
AL3G42830 Arabidopsis lyrata
Aqoxy1G04250 Aquilegia oxysepala
AT2G05320 Arabidopsis thaliana
ATR0827G116 Amborella trichopoda
Atru.BG.41.p Acer truncatum
Atru.chr6.3393 Acer truncatum
AUR62015007 Chenopodium quinoa
AUR62029116 Chenopodium quinoa
BcaB08g34500 Brassica carinata
BcaC01g03165 Brassica carinata
BolC3t17819H Brassica oleracea
BraA03t13594Z Brassica rapa
C03p55440 Brassica napus
CAN.G177.8 Capsicum annuum
CANSAT64G2535 Cannabis sativa
CARHR103100 Cardamine hirsuta
Carub.0003s2938 Capsella rubella
Ca_25000_v3 Cicer arietinum L.
Ca_30801_v3 Cicer arietinum L.
CBR_g52107 Chara braunii
Cc08_g02360 Coffea canephora
CDE05G3376 Ceratophyllum demersum
Cfa014228 Carpinus fangiana
Ciclev10015287m.g Citrus clementina
CiPaw.04G196900 Carya illinoinensis
ClCG02G002870 Citrullus lanatus
COL.COLO4_33334 Corchorus olitorius
Cpa.g.sc136.28 Carica papaya
CsaV3_7G002510 Cucumis sativus L.
CsaV3_7G002520 Cucumis sativus L.
CSS0001355 Camellia sinensis var. sinensis
CSS0018959 Camellia sinensis var. sinensis
CSS0036117 Camellia sinensis var. sinensis
CSS0038739 Camellia sinensis var. sinensis
DCAR_019683 Daucus carota
Dinv26607 Davidia involucrata
Duzib138G1954 Durio zibethinus
Duzib211G0350 Durio zibethinus
ECA236G0403 Erigeron canadensis
EL10Ac8g18725 Beta vulgaris
EL10Ac8g18726 Beta vulgaris
EL10Ac9g21097 Beta vulgaris
Eucgr.H00879 Eucalyptus grandis
FAN02G2834 Fragaria x ananassa
FAN05G5154 Fragaria x ananassa
FAN09G3933 Fragaria x ananassa
FAN14G1195 Fragaria x ananassa
FvH4_6g40640 Fragaria vesca
Glyma.10G128800 Glycine max
Glyma.20G080200 Glycine max
Gohir.A07G191800 Gossypium hirsutum
Gohir.A11G149000 Gossypium hirsutum
Gohir.D07G198100 Gossypium hirsutum
Gohir.D11G156100 Gossypium hirsutum
Gorai.001G221700 Gossypium raimondii
Gorai.007G166200 Gossypium raimondii
HanXRQChr11g0329021 Helianthus annuus
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla
HPP92_001839 Vanilla planifolia
Lalb_Chr01g0011281 Lupinus albus
Lalb_Chr03g0036841 Lupinus albus
Lj1P796T26 Lonicera japonica
Lj6g0021297 Lotus japonicus
Lj8P135T89 Lonicera japonica
Lsat_1_v5_gn_7_96920 Lactuca sativa
Manes.12G065800 Manihot esculenta
Mapoly0086s0006 Marchantia polymorpha
MBI16_g07770_MAGBIO Magnolia biondii
MD09G1126500 Malus domestica
MD17G1116800 Malus domestica
Medtr1g046210 Medicago truncatula
MELO3C024194.2 Cucumis melo
Migut.J01779 Erythranthe guttata
Migut.K00073 Erythranthe guttata
MSTRG.10825 Avicennia marina
MSTRG.26113 Avicennia marina
MSTRG.6445 Avicennia marina
Nitab4.5_0001701g0190 Nicotiana tabacum
Nitab4.5_0001867g0080 Nicotiana tabacum
Nn1g02851 Nelumbo nucifera
Nn3g19725 Nelumbo nucifera
Nn5g28971 Nelumbo nucifera
Oeu064356.1 Olea europaea
Os02g0798100 Oryza sativa ssp. japonica
Peaxi162Scf00802g00022 Petunia axillaris
PGR083G2314 Punica granatum
PGSC0003DMG400017397 Solanum tuberosum
Phvul.007G239000 Phaseolus vulgaris
Potri.014G167200 Populus trichocarpa
Pp3c12_25130 Physcomitrium patens
Pp3c8_6700 Physcomitrium patens
Prupe.3G198000 Prunus persica
Psat6g109000 Pisum sativum
PSO210G7679 Papaver somniferum
PSO302G0043 Papaver somniferum
QL04p068533 Quercus lobata
RcHm_v2.0_Chr2g0156011 Rosa chinensis
Rhsim04G0027900 Rhododendron simsii
Rhsim06G0176400 Rhododendron simsii
Sabra14G0127200 Salix brachista
SalBow1G4868 Salvia bowleyana
SalBow6G1876 Salvia bowleyana
Sc21g0000520 Simmondsia chinensis
Sed0012767 Sechium edule
Sed0014474 Sechium edule
SEGI_05803 Sequoiadendron giganteum
SHI10157 Sapria himalayana
SMO358G0350 Selaginella moellendorffii
Solyc07g045470.3 Solanum lycopersicum
Sopen07g024010 Solanum pennellii
Sp3g23770 Schrenkiella parvula
TAR629G2010 Trochodendron aralioides
THA.LOC104808847 Tarenaya hassleriana
Thecc.01G195800 Theobroma cacao
Thhalv10002538m.g Eutrema salsugineum
TPR.G23976 Trifolium pratense
TWI18G0302 Tripterygium wilfordii
TWI75G1720 Tripterygium wilfordii
unitig_37.g12711 Utricularia gibba
vmacro12084 Vaccinium macrocarpon
VMungo0720G1520 Vigna mungo
Zm00001eb192260 Zea mays

User provided reference genes

Program Settings