Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p43500 Brassica napus
Aa31LG5G14470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4283 Anthoceros agrestis
Actinidia17301 Actinidia chinensis
AL3G13780 Arabidopsis lyrata
Aqoxy2G00451 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3D4EN7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.779YCA Arachis hypogaea
AT3G03890 Arabidopsis thaliana
ATR0737G078 Amborella trichopoda
Atru.chr2.1392 Acer truncatum
AUR62032048 Chenopodium quinoa
AUR62032699 Chenopodium quinoa
BcaC05g29895 Brassica carinata
BcaC05g29899 Brassica carinata
BcaC05g30245 Brassica carinata
BcaC05g30290 Brassica carinata
BolC5t34969H Brassica oleracea
BraA05t23090Z Brassica rapa
CAN.G323.2 Capsicum annuum
CANSAT78G0686 Cannabis sativa
CARHR078010 Cardamine hirsuta
Carub.0003s0312 Capsella rubella
Ca_08269_v3 Cicer arietinum L.
CBR_g45943 Chara braunii
Cc06_g23030 Coffea canephora
CDE05G2375 Ceratophyllum demersum
Cfa016446 Carpinus fangiana
Ciclev10021129m.g Citrus clementina
CiPaw.09G002300 Carya illinoinensis
ClCG04G005340 Citrullus lanatus
COL.COLO4_36081 Corchorus olitorius
Cpa.g.sc51.125 Carica papaya
Cre02.g098250 Chlamydomonas reinhardtii
CsaV3_4G013250 Cucumis sativus L.
CSS0008476 Camellia sinensis var. sinensis
DCAR_013685 Daucus carota
Dinv37019 Davidia involucrata
Duzib106G1826 Durio zibethinus
Duzib177G0997 Durio zibethinus
ECA233G0564 Erigeron canadensis
ECA248G0640 Erigeron canadensis
EL10Ac3g06825 Beta vulgaris
Eucgr.K01500 Eucalyptus grandis
FAN19G2205 Fragaria x ananassa
FAN26G3022 Fragaria x ananassa
FAN28G1937 Fragaria x ananassa
FvH4_1g28200 Fragaria vesca
Glyma.16G040700 Glycine max
Glyma.19G112500 Glycine max
Gohir.A11G235800 Gossypium hirsutum
Gohir.D11G246700 Gossypium hirsutum
Gorai.007G262600 Gossypium raimondii
GSVIVG01033407001 Vitis vinifera
HanXRQChr02g0054551 Helianthus annuus
HanXRQChr03g0090471 Helianthus annuus
Haze_19424 Corylus avellana
Hma1.2p1_0152F.1_g067630 Hydrangea macrophylla
Hma1.2p1_0152F.1_g067640 Hydrangea macrophylla
Hma1.2p1_0152F.1_g067650 Hydrangea macrophylla
HPP92_018470 Vanilla planifolia
HPP92_018481 Vanilla planifolia
Hund19233 Selenicereus undatus
Hund24832 Selenicereus undatus
Lalb_Chr14g0364531 Lupinus albus
Lj1A1136T62 Lonicera japonica
Lj1g0017420 Lotus japonicus
Lsat_1_v5_gn_1_59740 Lactuca sativa
Lsat_1_v5_gn_6_37360 Lactuca sativa
Manes.08G144700 Manihot esculenta
Manes.09G140900 Manihot esculenta
Mapoly0041s0079 Marchantia polymorpha
MBI01_g13088_MAGBIO Magnolia biondii
MCO02G120 Micromonas commoda
MD12G1004000 Malus domestica
MD12G1004200 Malus domestica
MD14G1002900 Malus domestica
Medtr7g085670 Medicago truncatula
MELO3C008805.2 Cucumis melo
Migut.J01884 Erythranthe guttata
Migut.K00008 Erythranthe guttata
MSTRG.26068 Avicennia marina
Nitab4.5_0000394g0050 Nicotiana tabacum
Nitab4.5_0000626g0030 Nicotiana tabacum
Nn7g35862 Nelumbo nucifera
Oeu046747.1 Olea europaea
Os07g0573800 Oryza sativa ssp. japonica
Peaxi162Scf00463g00021 Petunia axillaris
PGR142G0352 Punica granatum
PGR142G2967 Punica granatum
PGSC0003DMG400033345 Solanum tuberosum
Phvul.001G111200 Phaseolus vulgaris
Potri.013G057700 Populus trichocarpa
Potri.019G035200 Populus trichocarpa
Pp3c3_4160 Physcomitrium patens
PRCOL_00004085 Prasinoderma coloniale
Prupe.7G004600 Prunus persica
Psat6g151880 Pisum sativum
PSO339G6099 Papaver somniferum
PSO384G2178 Papaver somniferum
QL07p018334 Quercus lobata
RcHm_v2.0_Chr3g0497041 Rosa chinensis
Rhsim04G0091400 Rhododendron simsii
Rhsim04G0092500 Rhododendron simsii
Sabra13G0051400 Salix brachista
Sabra19G0043600 Salix brachista
Sabra19G0046900 Salix brachista
SalBow1G1671 Salvia bowleyana
SalBow5G3131 Salvia bowleyana
SalBow6G2467 Salvia bowleyana
Sc25g0004990 Simmondsia chinensis
Sed0009892 Sechium edule
SEGI_07225 Sequoiadendron giganteum
SEGI_12732 Sequoiadendron giganteum
SEGI_13883 Sequoiadendron giganteum
SGA_v2.0_scaffold69G23026 Striga asiatica
SGA_v2.0_scaffold94G28403 Striga asiatica
SMO358G0221 Selaginella moellendorffii
Solyc03g063240.3 Solanum lycopersicum
Sopen03g015800 Solanum pennellii
Sp3g02860 Schrenkiella parvula
TAR623G1171 Trochodendron aralioides
THA.LOC104820775 Tarenaya hassleriana
Thecc.05G250300 Theobroma cacao
Thhalv10021141m.g Eutrema salsugineum
TPR.G5910 Trifolium pratense
TWI60G0250 Tripterygium wilfordii
unitig_46.g18447 Utricularia gibba
vmacro09136 Vaccinium macrocarpon
VMungo1383G3468 Vigna mungo
Zm00001eb325150 Zea mays

User provided reference genes

Program Settings