Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p36640 Brassica napus
A09p04060 Brassica napus
Aa31LG2G3900 Aethionema arabicum
Actinidia38836 Actinidia chinensis
Ah.10g032260 Amaranthus hybridus
AL5G19590 Arabidopsis lyrata
Aqoxy3G03693 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EQE0CJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J3LTHX Arachis hypogaea
AT3G29390 Arabidopsis thaliana
ATR0177G014 Amborella trichopoda
Atru.chr8.458 Acer truncatum
AUR62018183 Chenopodium quinoa
AUR62038668 Chenopodium quinoa
BcaB07g30079 Brassica carinata
BcaC03g17562 Brassica carinata
BcaC03g17580 Brassica carinata
BolC2t11584H Brassica oleracea
BolC2t11616H Brassica oleracea
BraA02t08659Z Brassica rapa
BraA09t36042Z Brassica rapa
C02p55600 Brassica napus
CAN.G398.20 Capsicum annuum
CANSAT64G1701 Cannabis sativa
CARHR153030 Cardamine hirsuta
CARHR284270 Cardamine hirsuta
Carub.0005s0814 Capsella rubella
Ca_04352_v3 Cicer arietinum L.
Ca_30479_v3 Cicer arietinum L.
CBR_g19543 Chara braunii
Cc07_g04190 Coffea canephora
CDE02G4269 Ceratophyllum demersum
CDE05G1269 Ceratophyllum demersum
CDE05G3437 Ceratophyllum demersum
Cfa007665 Carpinus fangiana
Ciclev10011374m.g Citrus clementina
CiPaw.03G088800 Carya illinoinensis
CiPaw.04G055900 Carya illinoinensis
ClCG07G016350 Citrullus lanatus
COL.COLO4_07027 Corchorus olitorius
COL.COLO4_07028 Corchorus olitorius
Cpa.g.sc14.172 Carica papaya
Cpa.g.sc14.174 Carica papaya
Cre09.g389900 Chlamydomonas reinhardtii
CsaV3_4G009190 Cucumis sativus L.
CSS0007202 Camellia sinensis var. sinensis
CSS0026219 Camellia sinensis var. sinensis
DCAR_005549 Daucus carota
Dinv34943 Davidia involucrata
Duzib264G0491 Durio zibethinus
ECA246G0757 Erigeron canadensis
EL10Ac2g03139 Beta vulgaris
Eucgr.J01380 Eucalyptus grandis
FAN02G0083 Fragaria x ananassa
FAN05G2596 Fragaria x ananassa
FAN05G2601 Fragaria x ananassa
FAN05G3222 Fragaria x ananassa
FAN09G0451 Fragaria x ananassa
FAN14G4567 Fragaria x ananassa
FAN26G0509 Fragaria x ananassa
FvH4_6g46910 Fragaria vesca
Glyma.08G245100 Glycine max
Glyma.18G266400 Glycine max
Gohir.A11G072800 Gossypium hirsutum
Gohir.D11G077100 Gossypium hirsutum
Gorai.007G082800 Gossypium raimondii
GSVIVG01032902001 Vitis vinifera
HanXRQChr17g0546081 Helianthus annuus
Haze_14433 Corylus avellana
Hma1.2p1_0481F.1_g162130 Hydrangea macrophylla
Hma1.2p1_0481F.1_g162140 Hydrangea macrophylla
Hma1.2p1_0481F.1_g162150 Hydrangea macrophylla
HPP92_007749 Vanilla planifolia
HPP92_007750 Vanilla planifolia
HPP92_007829 Vanilla planifolia
Hund15552 Selenicereus undatus
Lalb_Chr17g0337001 Lupinus albus
Lj1g0023913 Lotus japonicus
Lj4A118G52 Lonicera japonica
Lsat_1_v5_gn_3_97780 Lactuca sativa
Manes.02G054700 Manihot esculenta
Mapoly0218s0012 Marchantia polymorpha
MBI19_g00630_MAGBIO Magnolia biondii
MBI19_g00631_MAGBIO Magnolia biondii
MD09G1066300 Malus domestica
MD09G1066400 Malus domestica
Medtr7g013700 Medicago truncatula
MELO3C022635.2 Cucumis melo
Migut.H00628 Erythranthe guttata
MSTRG.23885 Avicennia marina
Nitab4.5_0000212g0230 Nicotiana tabacum
Nitab4.5_0010627g0030 Nicotiana tabacum
Nn4g23426 Nelumbo nucifera
Oeu004412.3 Olea europaea
Oeu051018.1 Olea europaea
Os03g0213900 Oryza sativa ssp. japonica
Peaxi162Scf00991g00329 Petunia axillaris
Peaxi162Scf00991g00335 Petunia axillaris
PGR004G1158 Punica granatum
PGSC0003DMG400025145 Solanum tuberosum
Phvul.008G033600 Phaseolus vulgaris
Potri.017G093600 Populus trichocarpa
Pp3c3_22820 Physcomitrium patens
Prupe.3G255200 Prunus persica
Psat3g201920 Pisum sativum
PSO017G6380 Papaver somniferum
PSO478G1877 Papaver somniferum
QL02p067640 Quercus lobata
RcHm_v2.0_Chr2g0165881 Rosa chinensis
Rhsim10G0048800 Rhododendron simsii
Sabra17G0082500 Salix brachista
SalBow1G7079 Salvia bowleyana
Sc10g0004660 Simmondsia chinensis
Sc10g0004670 Simmondsia chinensis
Sed0005820 Sechium edule
SEGI_00365 Sequoiadendron giganteum
SEGI_40404 Sequoiadendron giganteum
SHI25684 Sapria himalayana
SHI25685 Sapria himalayana
Solyc02g066940.4 Solanum lycopersicum
Sopen02g016130 Solanum pennellii
Sp2g17990 Schrenkiella parvula
TAR264G0002 Trochodendron aralioides
THA.LOC104823889 Tarenaya hassleriana
Thecc.04G095300 Theobroma cacao
Thhalv10003901m.g Eutrema salsugineum
TPR.G33475 Trifolium pratense
TWI32G0586 Tripterygium wilfordii
unitig_52.g17640 Utricularia gibba
vmacro05632 Vaccinium macrocarpon
Zm00001eb008620 Zea mays

User provided reference genes

Program Settings