Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p17420 Brassica napus
Aa31LG7G5530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis
Actinidia15154 Actinidia chinensis
Ah.01g005030 Amaranthus hybridus
Ah.02g110550 Amaranthus hybridus
AL1G34470 Arabidopsis lyrata
Aqoxy6G00385 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea
AT1G21370 Arabidopsis thaliana
ATR1136G139 Amborella trichopoda
Atru.chr13.1712 Acer truncatum
AUR62025132 Chenopodium quinoa
AUR62037127 Chenopodium quinoa
BcaB03g12819 Brassica carinata
BcaB07g32125 Brassica carinata
BcaC05g26044 Brassica carinata
BcaC07g39093 Brassica carinata
BolC5t30719H Brassica oleracea
BolC8t49716H Brassica oleracea
BraA06t24839Z Brassica rapa
C05p20260 Brassica napus
C06p40100 Brassica napus
C08p20770 Brassica napus
CAN.G62.45 Capsicum annuum
CANSAT25G3881 Cannabis sativa
CARHR021760 Cardamine hirsuta
Carub.0001s2078 Capsella rubella
Ca_12665_v3 Cicer arietinum L.
Cc10_g14250 Coffea canephora
CDE06G2625 Ceratophyllum demersum
CDE08G1689 Ceratophyllum demersum
Cfa018352 Carpinus fangiana
Ciclev10001700m.g Citrus clementina
CiPaw.15G020800 Carya illinoinensis
CiPaw.16G016900 Carya illinoinensis
ClCG09G009860 Citrullus lanatus
COL.COLO4_04848 Corchorus olitorius
Cpa.g.sc49.54 Carica papaya
Cre02.g116000 Chlamydomonas reinhardtii
CsaV3_7G024870 Cucumis sativus L.
CSS0044653 Camellia sinensis var. sinensis
CSS0049727 Camellia sinensis var. sinensis
DCAR_008158 Daucus carota
Dinv25817 Davidia involucrata
Duzib093G0547 Durio zibethinus
ECA247G2705 Erigeron canadensis
EL10Ac9g20647 Beta vulgaris
Eucgr.F04261 Eucalyptus grandis
FAN15G3392 Fragaria x ananassa
FAN20G0686 Fragaria x ananassa
FAN24G1565 Fragaria x ananassa
FAN27G0920 Fragaria x ananassa
FvH4_2g14460 Fragaria vesca
Glyma.13G039000 Glycine max
Glyma.14G123000 Glycine max
Gohir.A02G066200 Gossypium hirsutum
Gohir.A02G108508 Gossypium hirsutum
Gohir.A02G108509 Gossypium hirsutum
Gohir.D02G072100 Gossypium hirsutum
Gohir.D03G061500 Gossypium hirsutum
Gorai.005G081300 Gossypium raimondii
Gorai.013G105300 Gossypium raimondii
GSVIVG01010048001 Vitis vinifera
HanXRQChr04g0109001 Helianthus annuus
HanXRQChr08g0217661 Helianthus annuus
Haze_17707 Corylus avellana
HPP92_004629 Vanilla planifolia
Lalb_Chr04g0263651 Lupinus albus
Lj1g0023019 Lotus japonicus
Lj4A692T31 Lonicera japonica
Lj7A365T41 Lonicera japonica
Lsat_1_v5_gn_1_8980 Lactuca sativa
Manes.02G175900 Manihot esculenta
Mapoly0050s0105 Marchantia polymorpha
MBI03_g11319_MAGBIO Magnolia biondii
MCO04G174 Micromonas commoda
MD05G1017500 Malus domestica
MD10G1017500 Malus domestica
Medtr1g029000 Medicago truncatula
MELO3C023695.2 Cucumis melo
Migut.N03230 Erythranthe guttata
MSTRG.24200 Avicennia marina
Nitab4.5_0000633g0110 Nicotiana tabacum
Nitab4.5_0008475g0010 Nicotiana tabacum
Nn1g06190 Nelumbo nucifera
Nn5g28652 Nelumbo nucifera
Oeu014478.2 Olea europaea
Oeu051259.1 Olea europaea
Os04g0438500 Oryza sativa ssp. japonica
Peaxi162Scf00051g00516 Petunia axillaris
PGR042G3502 Punica granatum
PGSC0003DMG400017575 Solanum tuberosum
Phvul.001G072900 Phaseolus vulgaris
Potri.002G071300 Populus trichocarpa
Pp3c16_22840 Physcomitrium patens
Pp3c25_12020 Physcomitrium patens
Pp3c5_24650 Physcomitrium patens
Pp3c6_4630 Physcomitrium patens
PRCOL_00006391 Prasinoderma coloniale
Prupe.8G021400 Prunus persica
Psat0s5561g0040 Pisum sativum
PSO541G2188 Papaver somniferum
PSO675G8728 Papaver somniferum
QL02p024995 Quercus lobata
RcHm_v2.0_Chr6g0276791 Rosa chinensis
Sabra02G0056100 Salix brachista
Sc02g0004370 Simmondsia chinensis
Sed0017044 Sechium edule
SEGI_37970 Sequoiadendron giganteum
SGA_v2.0_scaffold25G11170 Striga asiatica
SGA_v2.0_scaffold35G14052 Striga asiatica
SGA_v2.0_scaffold35G14089 Striga asiatica
SHI09110 Sapria himalayana
SMO228G0011 Selaginella moellendorffii
Solyc06g060460.3 Solanum lycopersicum
Sopen06g020580 Solanum pennellii
Sp1g18920 Schrenkiella parvula
TAR381G0495 Trochodendron aralioides
TAR625G0955 Trochodendron aralioides
THA.LOC104813696 Tarenaya hassleriana
Thecc.08G145800 Theobroma cacao
Thhalv10008107m.g Eutrema salsugineum
TPR.G33300 Trifolium pratense
TWI34G1885 Tripterygium wilfordii
TWI60G1394 Tripterygium wilfordii
unitig_21.g20180 Utricularia gibba
unitig_744.g24565 Utricularia gibba
VMungo0647G2124 Vigna mungo
Zm00001eb422860 Zea mays

User provided reference genes

Program Settings