Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p22240 Brassica napus
A07p43860 Brassica napus
Aa31LG4G2370 Aethionema arabicum
Actinidia12605 Actinidia chinensis
Ah.04g164020 Amaranthus hybridus
AL2G38990 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.U60PIC Arachis hypogaea
AT1G78590 Arabidopsis thaliana
ATR0602G094 Amborella trichopoda
Atru.chr2.1938 Acer truncatum
Atru.chr2.1967 Acer truncatum
AUR62019651 Chenopodium quinoa
AUR62039577 Chenopodium quinoa
BcaB05g25146 Brassica carinata
BcaC03g15825 Brassica carinata
BcaC08g47430 Brassica carinata
BolC2t09587H Brassica oleracea
BolC6t40268H Brassica oleracea
BraA02t07230Z Brassica rapa
BraA07t31893Z Brassica rapa
C02p35670 Brassica napus
C06p52490 Brassica napus
CAN.G375.51 Capsicum annuum
CANSAT56G1876 Cannabis sativa
CARHR072080 Cardamine hirsuta
Carub.0002s2544 Capsella rubella
Ca_03928_v3 Cicer arietinum L.
Ca_30126_v3 Cicer arietinum L.
CBR_g12698 Chara braunii
Cc05_g10700 Coffea canephora
CDE03G0511 Ceratophyllum demersum
CDE04G1397 Ceratophyllum demersum
Cfa019519 Carpinus fangiana
Ciclev10021233m.g Citrus clementina
CiPaw.11G156000 Carya illinoinensis
ClCG07G010140 Citrullus lanatus
COL.COLO4_17472 Corchorus olitorius
Cpa.g.sc77.63 Carica papaya
CsaV3_4G008190 Cucumis sativus L.
CSS0003385 Camellia sinensis var. sinensis
CSS0022288 Camellia sinensis var. sinensis
DCAR_019616 Daucus carota
Dinv13362 Davidia involucrata
Dinv26706 Davidia involucrata
Duzib268G1415 Durio zibethinus
ECA240G1635 Erigeron canadensis
EL10Ac4g08418 Beta vulgaris
Eucgr.F01368 Eucalyptus grandis
Eucgr.F03233 Eucalyptus grandis
FAN11G1972 Fragaria x ananassa
FAN16G0946 Fragaria x ananassa
FAN21G1616 Fragaria x ananassa
FAN25G0059 Fragaria x ananassa
FvH4_3g17730 Fragaria vesca
Glyma.12G234000 Glycine max
Glyma.13G264900 Glycine max
Gohir.A01G047600 Gossypium hirsutum
Gohir.D01G038300 Gossypium hirsutum
Gorai.002G047000 Gossypium raimondii
GSVIVG01014095001 Vitis vinifera
HanXRQChr13g0389731 Helianthus annuus
HanXRQChr14g0439341 Helianthus annuus
Haze_09249 Corylus avellana
Hma1.2p1_0050F.1_g028770 Hydrangea macrophylla
HPP92_006378 Vanilla planifolia
Lalb_Chr20g0109151 Lupinus albus
Lj1C824T4 Lonicera japonica
Lj3g0000598 Lotus japonicus
Lj3g0003080 Lotus japonicus
Lj8A146G66 Lonicera japonica
Lsat_1_v5_gn_9_100380 Lactuca sativa
Manes.15G098700 Manihot esculenta
Mapoly0214s0005 Marchantia polymorpha
MBI06_g08515_MAGBIO Magnolia biondii
MCO14G555 Micromonas commoda
MD03G1247500 Malus domestica
MD03G1248900 Malus domestica
MD11G1270000 Malus domestica
MD11G1270100 Malus domestica
Medtr2g073350 Medicago truncatula
MELO3C016117.2 Cucumis melo
Migut.M00692 Erythranthe guttata
MSTRG.6692 Avicennia marina
Nitab4.5_0000347g0030 Nicotiana tabacum
Nitab4.5_0003230g0040 Nicotiana tabacum
Nn6g34421 Nelumbo nucifera
Oeu005377.2 Olea europaea
Oeu059254.1 Olea europaea
Os09g0345700 Oryza sativa ssp. japonica
Peaxi162Scf00111g01321 Petunia axillaris
PGR031G3165 Punica granatum
PGR083G1570 Punica granatum
PGSC0003DMG400007060 Solanum tuberosum
Phvul.005G076600 Phaseolus vulgaris
Potri.011G104400 Populus trichocarpa
Pp3c14_23600 Physcomitrium patens
PRCOL_00004450 Prasinoderma coloniale
Prupe.4G156300 Prunus persica
Prupe.4G156400 Prunus persica
Psat5g233200 Pisum sativum
Psat5g275400 Pisum sativum
PSO541G5634 Papaver somniferum
PSO675G5422 Papaver somniferum
QL08p024148 Quercus lobata
RcHm_v2.0_Chr5g0029501 Rosa chinensis
RcHm_v2.0_Chr5g0029511 Rosa chinensis
Rhsim06G0211900 Rhododendron simsii
Sabra11G0076500 Salix brachista
Sabra11G0081200 Salix brachista
SalBow7G3240 Salvia bowleyana
SalBow8G3868 Salvia bowleyana
Sc03g0010720 Simmondsia chinensis
Sc16g0007750 Simmondsia chinensis
Sed0005123 Sechium edule
SGA_v2.0_scaffold181G39767 Striga asiatica
SHI27565 Sapria himalayana
SMO169G0094 Selaginella moellendorffii
Solyc07g062150.3 Solanum lycopersicum
Sopen07g030420 Solanum pennellii
Sp5g33680 Schrenkiella parvula
TAR624G1186 Trochodendron aralioides
TAR626G1650 Trochodendron aralioides
THA.LOC104808088 Tarenaya hassleriana
THA.LOC104813991 Tarenaya hassleriana
Thecc.07G133000 Theobroma cacao
Thhalv10018897m.g Eutrema salsugineum
TPR.G12996 Trifolium pratense
TWI39G0770 Tripterygium wilfordii
unitig_62.g23076 Utricularia gibba
vmacro11973 Vaccinium macrocarpon
Zm00001eb098430 Zea mays

User provided reference genes

Program Settings