Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p19300 Brassica napus
Aa31LG4G16970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2604 Anthoceros agrestis
Actinidia08849 Actinidia chinensis
Actinidia36773 Actinidia chinensis
Ah.15g095430 Amaranthus hybridus
AL5G27780 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.1AQ6ST Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9XY5HM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HVEI7F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L5KNWH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XFG60B Arachis hypogaea
AT3G48380 Arabidopsis thaliana
ATR0824G112 Amborella trichopoda
Atru.chr9.985 Acer truncatum
AUR62001257 Chenopodium quinoa
BcaB01g00818 Brassica carinata
BcaB01g00966 Brassica carinata
BcaC07g39322 Brassica carinata
BolC8t49966H Brassica oleracea
BraA06t25013Z Brassica rapa
C08p23370 Brassica napus
CAN.G472.50 Capsicum annuum
CAN.G546.38 Capsicum annuum
CAN.G755.4 Capsicum annuum
CANSAT80G1864 Cannabis sativa
CARHR157150 Cardamine hirsuta
Carub.0005s1454 Capsella rubella
Ca_16102_v3 Cicer arietinum L.
Ca_30078_v3 Cicer arietinum L.
CBR_g41805 Chara braunii
Cc04_g10700 Coffea canephora
CDE09G0792 Ceratophyllum demersum
Cfa018908 Carpinus fangiana
Ciclev10024180m.g Citrus clementina
CiPaw.12G034200 Carya illinoinensis
ClCG03G003330 Citrullus lanatus
Cpa.g.sc4.27 Carica papaya
Cpa.g.sc4.40 Carica papaya
Cpa.g.sc4.41 Carica papaya
Cre03.g197900 Chlamydomonas reinhardtii
CsaV3_1G009140 Cucumis sativus L.
CSS0006429 Camellia sinensis var. sinensis
CSS0019701 Camellia sinensis var. sinensis
DCAR_016428 Daucus carota
DCAR_016429 Daucus carota
Dinv11120 Davidia involucrata
Dinv12561 Davidia involucrata
Duzib084G1368 Durio zibethinus
ECA246G4586 Erigeron canadensis
EL10Ac7g18048 Beta vulgaris
Eucgr.B00167 Eucalyptus grandis
FAN04G1552 Fragaria x ananassa
FAN08G3509 Fragaria x ananassa
FAN18G3028 Fragaria x ananassa
FvH4_5g06921 Fragaria vesca
FvH4_5g06922 Fragaria vesca
FvH4_5g06930 Fragaria vesca
FvH4_5g06950 Fragaria vesca
FvH4_5g06990 Fragaria vesca
Glyma.04G191400 Glycine max
Glyma.06G174400 Glycine max
Gohir.A03G063200 Gossypium hirsutum
Gohir.D03G103100 Gossypium hirsutum
Gorai.003G108600 Gossypium raimondii
GSVIVG01007577001 Vitis vinifera
HanXRQChr05g0156141 Helianthus annuus
Haze_07292 Corylus avellana
HPP92_021417 Vanilla planifolia
HPP92_021434 Vanilla planifolia
HPP92_027096 Vanilla planifolia
Hund05620 Selenicereus undatus
Lalb_Chr11g0069771 Lupinus albus
Lj1g0007517 Lotus japonicus
Lj9C473G6 Lonicera japonica
Lsat_1_v5_gn_3_61521 Lactuca sativa
Lsat_1_v5_gn_4_154121 Lactuca sativa
Lsat_1_v5_gn_4_166800 Lactuca sativa
Lsat_1_v5_gn_5_13060 Lactuca sativa
Manes.06G113400 Manihot esculenta
Mapoly0004s0201 Marchantia polymorpha
MD06G1160100 Malus domestica
MD14G1166100 Malus domestica
Medtr3g075250 Medicago truncatula
MELO3C002321.2 Cucumis melo
Migut.D02037 Erythranthe guttata
MSTRG.4336 Avicennia marina
Nitab4.5_0001094g0140 Nicotiana tabacum
Nitab4.5_0001360g0160 Nicotiana tabacum
Nitab4.5_0006717g0030 Nicotiana tabacum
Nn4g22511 Nelumbo nucifera
Oeu053502.2 Olea europaea
Os12g0285500 Oryza sativa ssp. japonica
Peaxi162Scf00089g00935 Petunia axillaris
PGR083G2177 Punica granatum
PGSC0003DMG400015231 Solanum tuberosum
Phvul.009G170100 Phaseolus vulgaris
Potri.015G088200 Populus trichocarpa
Pp3c6_16550 Physcomitrium patens
PRCOL_00005175 Prasinoderma coloniale
Prupe.5G160400 Prunus persica
Psat5g139520 Pisum sativum
PSO782G4995 Papaver somniferum
QL10p005632 Quercus lobata
RcHm_v2.0_Chr7g0191691 Rosa chinensis
Rhsim12G0171000 Rhododendron simsii
Sabra15G0111200 Salix brachista
SalBow8G1380 Salvia bowleyana
SalBow8G5300 Salvia bowleyana
Sc10g0010320 Simmondsia chinensis
Sed0018918 Sechium edule
SEGI_38992 Sequoiadendron giganteum
SGA_v2.0_scaffold7G04178 Striga asiatica
SMO201G0062 Selaginella moellendorffii
SMO201G0174 Selaginella moellendorffii
SMO328G0007 Selaginella moellendorffii
Solyc03g111660.3 Solanum lycopersicum
Sopen03g030780 Solanum pennellii
Sp5g13670 Schrenkiella parvula
TAR622G0554 Trochodendron aralioides
TAR622G0802 Trochodendron aralioides
THA.LOC104818202 Tarenaya hassleriana
Thecc.03G120400 Theobroma cacao
Thhalv10010185m.g Eutrema salsugineum
TPR.G38611 Trifolium pratense
TWI39G0152 Tripterygium wilfordii
unitig_21.g20435 Utricularia gibba
unitig_21.g20436 Utricularia gibba
vmacro16696 Vaccinium macrocarpon
VMungo1309G2614 Vigna mungo
Zm00001eb133430 Zea mays

User provided reference genes

Program Settings