Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21090 Brassica napus
A03p49850 Brassica napus
Aa31LG2G12530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3129 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.698 Anthoceros agrestis
Actinidia00094 Actinidia chinensis
Actinidia05033 Actinidia chinensis
Ah.06g181210 Amaranthus hybridus
AL7G38530 Arabidopsis lyrata
Aqoxy4G02214 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CR688Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R43TP7 Arachis hypogaea
AT4G16450 Arabidopsis thaliana
ATR0564G257 Amborella trichopoda
Atru.chr1.2350 Acer truncatum
AUR62017059 Chenopodium quinoa
AUR62040659 Chenopodium quinoa
BcaC06g33480 Brassica carinata
BcaC09g50351 Brassica carinata
BcaNung00192 Brassica carinata
BolC1t02582H Brassica oleracea
BolC7t45314H Brassica oleracea
BraA03t14080Z Brassica rapa
C01p26360 Brassica napus
C07p47910 Brassica napus
CAN.G337.28 Capsicum annuum
CANSAT56G3985 Cannabis sativa
CARHR222840 Cardamine hirsuta
Carub.0007s2505 Capsella rubella
Ca_00743_v3 Cicer arietinum L.
CBR_g41406 Chara braunii
CBR_g50091 Chara braunii
Cc05_g14690 Coffea canephora
CDE01G0018 Ceratophyllum demersum
CDE12G0176 Ceratophyllum demersum
Cfa000074 Carpinus fangiana
Ciclev10016738m.g Citrus clementina
CiPaw.10G079600 Carya illinoinensis
ClCG01G010630 Citrullus lanatus
COL.COLO4_07784 Corchorus olitorius
Cpa.g.sc3096.1 Carica papaya
CsaV3_1G017030 Cucumis sativus L.
CsaV3_UNG053450 Cucumis sativus L.
CSS0045306 Camellia sinensis var. sinensis
DCAR_013214 Daucus carota
Dinv10313 Davidia involucrata
Duzib192G0253 Durio zibethinus
Duzib235G0800 Durio zibethinus
ECA246G1213 Erigeron canadensis
EL10Ac4g07614 Beta vulgaris
Eucgr.D00619 Eucalyptus grandis
FAN21G1761 Fragaria x ananassa
FAN25G0933 Fragaria x ananassa
FvH4_3g00660 Fragaria vesca
Glyma.09G011900 Glycine max
Glyma.15G116500 Glycine max
Gohir.A06G204600 Gossypium hirsutum
Gohir.D06G216900 Gossypium hirsutum
Gorai.010G249300 Gossypium raimondii
GSVIVG01037779001 Vitis vinifera
HanXRQChr08g0213481 Helianthus annuus
HanXRQChr17g0564261 Helianthus annuus
Haze_06972 Corylus avellana
HPP92_013264 Vanilla planifolia
Hund23128 Selenicereus undatus
Lalb_Chr03g0035721 Lupinus albus
Lalb_Chr19g0129971 Lupinus albus
Lj6g0002817 Lotus japonicus
Manes.09G081660 Manihot esculenta
Mapoly0008s0024 Marchantia polymorpha
MBI04_g07210_MAGBIO Magnolia biondii
MBI04_g36325_MAGBIO Magnolia biondii
MCO11G626 Micromonas commoda
MD00G1058600 Malus domestica
MD10G1336200 Malus domestica
Medtr2g026500 Medicago truncatula
Medtr2g097750 Medicago truncatula
MELO3C025540.2 Cucumis melo
Migut.M01676 Erythranthe guttata
MSTRG.13010 Avicennia marina
MSTRG.14470 Avicennia marina
Nitab4.5_0000163g0320 Nicotiana tabacum
Nitab4.5_0000461g0100 Nicotiana tabacum
Nitab4.5_0001750g0060 Nicotiana tabacum
Nitab4.5_0005540g0030 Nicotiana tabacum
Nn5g27130 Nelumbo nucifera
Oeu005493.1 Olea europaea
Oeu005968.1 Olea europaea
Os08g0431500 Oryza sativa ssp. japonica
Peaxi162Scf00285g00824 Petunia axillaris
Peaxi162Scf00955g00216 Petunia axillaris
PGR004G2260 Punica granatum
PGSC0003DMG400022186 Solanum tuberosum
Phvul.006G141600 Phaseolus vulgaris
Potri.006G016300 Populus trichocarpa
Potri.016G009600 Populus trichocarpa
Pp3c6_28950 Physcomitrium patens
Prupe.4G007400 Prunus persica
Psat1g178480 Pisum sativum
PSO063G2191 Papaver somniferum
PSO832G1566 Papaver somniferum
QL05p068624 Quercus lobata
QL05p068978 Quercus lobata
RcHm_v2.0_Chr5g0000881 Rosa chinensis
Rhsim06G0226700 Rhododendron simsii
Sabra06G0011700 Salix brachista
Sabra16G0013400 Salix brachista
Sc03g0008000 Simmondsia chinensis
Sed0000190 Sechium edule
Sed0000308 Sechium edule
SEGI_25373 Sequoiadendron giganteum
SEGI_29999 Sequoiadendron giganteum
SGA_v2.0_scaffold168G38531 Striga asiatica
SMO223G0003 Selaginella moellendorffii
Solyc07g065275.1 Solanum lycopersicum
Sopen07g033490 Solanum pennellii
Sp7g15010 Schrenkiella parvula
TAR626G0394 Trochodendron aralioides
TAR627G0003 Trochodendron aralioides
THA.LOC104810390 Tarenaya hassleriana
THA.LOC104815483 Tarenaya hassleriana
Thecc.06G236600 Theobroma cacao
Thhalv10026636m.g Eutrema salsugineum
TPR.G10599 Trifolium pratense
TWI63G1647 Tripterygium wilfordii
unitig_747.g21642 Utricularia gibba
vmacro09668 Vaccinium macrocarpon
vmacro11561 Vaccinium macrocarpon
VMungo0540G2179 Vigna mungo
Zm00001eb041720 Zea mays
Zm00001eb179550 Zea mays

User provided reference genes

Program Settings