Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p40610 Brassica napus
A09p04390 Brassica napus
Aa31LG5G18140 Aethionema arabicum
Actinidia23817 Actinidia chinensis
Ah.04g163410 Amaranthus hybridus
AL3G18940 Arabidopsis lyrata
AL8G21060 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.B4TR6Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DJH8FA Arachis hypogaea
AT3G07580 Arabidopsis thaliana
AT5G48335 Arabidopsis thaliana
ATR0743G072 Amborella trichopoda
Atru.chr6.3466 Acer truncatum
AUR62017763 Chenopodium quinoa
AUR62032915 Chenopodium quinoa
BcaC04g23782 Brassica carinata
BcaC05g29553 Brassica carinata
BolC5t34626H Brassica oleracea
BolC9t53398H Brassica oleracea
BraA05t22792Z Brassica rapa
BraA09t36076Z Brassica rapa
C05p59720 Brassica napus
C09p04700 Brassica napus
CAN.G874.50 Capsicum annuum
CANSAT11G0965 Cannabis sativa
CARHR082280 Cardamine hirsuta
CARHR183920 Cardamine hirsuta
CARHR259910 Cardamine hirsuta
Carub.0003s0715 Capsella rubella
Carub.0008s0791 Capsella rubella
Ca_15291_v3 Cicer arietinum L.
CBR_g37947 Chara braunii
Cc01_g15730 Coffea canephora
CDE04G1688 Ceratophyllum demersum
CDE07G1966 Ceratophyllum demersum
Ciclev10016954m.g Citrus clementina
CiPaw.10G142500 Carya illinoinensis
CiPaw.13G059000 Carya illinoinensis
CiPaw.14G047400 Carya illinoinensis
CiPaw.16G094700 Carya illinoinensis
COL.COLO4_19718 Corchorus olitorius
Cpa.g.sc8.7 Carica papaya
CSS0023701 Camellia sinensis var. sinensis
CSS0036227 Camellia sinensis var. sinensis
DCAR_018600 Daucus carota
Dinv28773 Davidia involucrata
Duzib133G0028 Durio zibethinus
Duzib138G0279 Durio zibethinus
ECA247G1400 Erigeron canadensis
EL10Ac9g23025 Beta vulgaris
Eucgr.K02345 Eucalyptus grandis
FAN04G1498 Fragaria x ananassa
FAN08G0048 Fragaria x ananassa
FAN13G0560 Fragaria x ananassa
FAN18G0660 Fragaria x ananassa
FvH4_5g18680 Fragaria vesca
Glyma.04G002700 Glycine max
Glyma.06G002700 Glycine max
Glyma.20G044500 Glycine max
Gohir.A11G146200 Gossypium hirsutum
Gohir.D07G124900 Gossypium hirsutum
Gohir.D09G141833 Gossypium hirsutum
Gohir.D11G007175 Gossypium hirsutum
Gohir.D11G152400 Gossypium hirsutum
Gohir.D11G304103 Gossypium hirsutum
Gorai.007G163000 Gossypium raimondii
Gorai.009G395900 Gossypium raimondii
GSVIVG01004128001 Vitis vinifera
HanXRQChr08g0230801 Helianthus annuus
Hma1.2p1_0161F.1_g071860 Hydrangea macrophylla
Hma1.2p1_0834F.1_g225730 Hydrangea macrophylla
Hma1.2p1_1756F.1_g301045 Hydrangea macrophylla
HPP92_004514 Vanilla planifolia
Lalb_Chr11g0061201 Lupinus albus
Lj1C108T9 Lonicera japonica
Lj1g0017920 Lotus japonicus
Lsat_1_v5_gn_9_15721 Lactuca sativa
Manes.12G055803 Manihot esculenta
Manes.13G058400 Manihot esculenta
MBI07_g44661_MAGBIO Magnolia biondii
MD03G1298800 Malus domestica
Medtr3g118100 Medicago truncatula
Migut.D00757 Erythranthe guttata
MSTRG.18519 Avicennia marina
Nitab4.5_0001348g0200 Nicotiana tabacum
Nitab4.5_0005967g0050 Nicotiana tabacum
Nitab4.5_0008751g0010 Nicotiana tabacum
Nitab4.5_0009028g0010 Nicotiana tabacum
Nn7g37421 Nelumbo nucifera
Oeu058218.1 Olea europaea
Oeu064700.1 Olea europaea
Os02g0599500 Oryza sativa ssp. japonica
Os02g0609400 Oryza sativa ssp. japonica
Peaxi162Scf00390g00125 Petunia axillaris
PGR044G1143 Punica granatum
PGSC0003DMG400020300 Solanum tuberosum
PGSC0003DMG400027679 Solanum tuberosum
Phvul.009G118300 Phaseolus vulgaris
Potri.014G172600 Populus trichocarpa
Prupe.8G267200 Prunus persica
Psat5g001840 Pisum sativum
PSO170G4201 Papaver somniferum
PSO357G0365 Papaver somniferum
QL09p044779 Quercus lobata
RcHm_v2.0_Chr7g0176831 Rosa chinensis
Rhsim01G0246100 Rhododendron simsii
Sabra14G0132200 Salix brachista
SalBow2G0316 Salvia bowleyana
SalBow6G0883 Salvia bowleyana
Sc10g0006540 Simmondsia chinensis
SGA_v2.0_scaffold8G04484 Striga asiatica
Solyc06g082830.3 Solanum lycopersicum
Solyc09g018900.3 Solanum lycopersicum
Sopen06g034190 Solanum pennellii
Sopen09g012660 Solanum pennellii
Sp3g06520 Schrenkiella parvula
TAR362G0776 Trochodendron aralioides
THA.LOC104819021 Tarenaya hassleriana
THA.LOC104822452 Tarenaya hassleriana
Thecc.01G203400 Theobroma cacao
Thhalv10005690m.g Eutrema salsugineum
Thhalv10021713m.g Eutrema salsugineum
TPR.G38510 Trifolium pratense
TWI18G0378 Tripterygium wilfordii
TWI36G0694 Tripterygium wilfordii
TWI36G1335 Tripterygium wilfordii
TWI75G1816 Tripterygium wilfordii
unitig_60.g25570 Utricularia gibba
vmacro14669 Vaccinium macrocarpon
VMungo1309G0397 Vigna mungo
Zm00001eb246760 Zea mays

User provided reference genes

Program Settings