Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p38170 Brassica napus
A09p05050 Brassica napus
Aa31LG11G8380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis
Actinidia18486 Actinidia chinensis
Actinidia28298 Actinidia chinensis
Actinidia31584 Actinidia chinensis
Ah.11g042100 Amaranthus hybridus
AL1G65220 Arabidopsis lyrata
AL6G41020 Arabidopsis lyrata
Aqoxy7G00454 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea
AT5G30490 Arabidopsis thaliana
ATR0693G149 Amborella trichopoda
Atru.chr4.3094 Acer truncatum
AUR62020284 Chenopodium quinoa
AUR62037721 Chenopodium quinoa
BcaB04g19640 Brassica carinata
BcaC04g23714 Brassica carinata
BcaC06g30693 Brassica carinata
BcaNung02118 Brassica carinata
BolC7t44538H Brassica oleracea
BolC9t53475H Brassica oleracea
BraA06t26732Z Brassica rapa
BraA09t36144Z Brassica rapa
C07p40040 Brassica napus
C09p05460 Brassica napus
CAN.G1173.8 Capsicum annuum
CANSAT78G1707 Cannabis sativa
CARHR185530 Cardamine hirsuta
Carub.0020s0004 Capsella rubella
Ca_13618_v3 Cicer arietinum L.
Ca_21401_v3 Cicer arietinum L.
CBR_g56129 Chara braunii
Cc00_g31090 Coffea canephora
Cc10_g13510 Coffea canephora
CDE05G0304 Ceratophyllum demersum
Cfa015696 Carpinus fangiana
Ciclev10005452m.g Citrus clementina
CiPaw.01G133100 Carya illinoinensis
ClCG06G004330 Citrullus lanatus
COL.COLO4_34551 Corchorus olitorius
Cpa.g.sc146.66 Carica papaya
Cre14.g632600 Chlamydomonas reinhardtii
CsaV3_6G000060 Cucumis sativus L.
CSS0003210 Camellia sinensis var. sinensis
CSS0020858 Camellia sinensis var. sinensis
DCAR_019078 Daucus carota
Dinv05101 Davidia involucrata
Duzib151G0057 Durio zibethinus
Duzib212G0712 Durio zibethinus
ECA234G0222 Erigeron canadensis
EL10Ac2g02410 Beta vulgaris
Eucgr.H04085 Eucalyptus grandis
FAN07G2713 Fragaria x ananassa
FAN12G0391 Fragaria x ananassa
FAN17G2933 Fragaria x ananassa
FvH4_4g20890 Fragaria vesca
Glyma.07G232800 Glycine max
Glyma.17G037800 Glycine max
Gohir.A02G056400 Gossypium hirsutum
Gohir.D02G061600 Gossypium hirsutum
Gorai.005G069300 Gossypium raimondii
GSVIVG01017610001 Vitis vinifera
GSVIVG01017621001 Vitis vinifera
GSVIVG01017622001 Vitis vinifera
GSVIVG01017637001 Vitis vinifera
HanXRQChr16g0526201 Helianthus annuus
Haze_00826 Corylus avellana
HPP92_017296 Vanilla planifolia
Lalb_Chr13g0298761 Lupinus albus
Lj4g0017646 Lotus japonicus
Lj9A696T49 Lonicera japonica
Lsat_1_v5_gn_4_27741 Lactuca sativa
Manes.03G209000 Manihot esculenta
Mapoly0030s0047 Marchantia polymorpha
MBI18_g36460_MAGBIO Magnolia biondii
MCO08G234 Micromonas commoda
MD13G1147500 Malus domestica
MD16G1145900 Malus domestica
Medtr4g123060 Medicago truncatula
MELO3C021248.2 Cucumis melo
Migut.I00898 Erythranthe guttata
MSTRG.22639 Avicennia marina
Nitab4.5_0003374g0080 Nicotiana tabacum
Nitab4.5_0013885g0020 Nicotiana tabacum
Nn3g21864 Nelumbo nucifera
Oeu009727.1 Olea europaea
Os01g0328500 Oryza sativa ssp. japonica
Peaxi162Scf00139g00312 Petunia axillaris
PGR004G0142 Punica granatum
PGR119G0116 Punica granatum
PGSC0003DMG400030844 Solanum tuberosum
Phvul.003G118700 Phaseolus vulgaris
Potri.010G151300 Populus trichocarpa
Pp3c5_15500 Physcomitrium patens
PRCOL_00003370 Prasinoderma coloniale
Prupe.1G111000 Prunus persica
Psat0s2692g0080 Pisum sativum
PSO017G0870 Papaver somniferum
PSO675G8194 Papaver somniferum
QL06p013384 Quercus lobata
RcHm_v2.0_Chr4g0426321 Rosa chinensis
Rhsim02G0001600 Rhododendron simsii
Sabra10G0116500 Salix brachista
Sc23g0006090 Simmondsia chinensis
Sed0009947 Sechium edule
SEGI_07358 Sequoiadendron giganteum
SMO203G0019 Selaginella moellendorffii
Solyc04g074800.3 Solanum lycopersicum
Sopen04g029760 Solanum pennellii
Sp2g19950 Schrenkiella parvula
Sp6g09550 Schrenkiella parvula
TAR362G0621 Trochodendron aralioides
TAR381G1490 Trochodendron aralioides
TAR633G0953 Trochodendron aralioides
THA.LOC104827106 Tarenaya hassleriana
Thecc.04G307900 Theobroma cacao
Thhalv10004825m.g Eutrema salsugineum
TPR.G12610 Trifolium pratense
TWI09G0093 Tripterygium wilfordii
TWI53G1476 Tripterygium wilfordii
TWI73G0156 Tripterygium wilfordii
unitig_32.g11589 Utricularia gibba
vmacro19301 Vaccinium macrocarpon
VMungo1215G0582 Vigna mungo
Zm00001eb131050 Zea mays
Zm00001eb340570 Zea mays

User provided reference genes

Program Settings