Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p39510 Brassica napus
Aa31LG3G14160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1585 Anthoceros agrestis
Actinidia13521 Actinidia chinensis
Actinidia33985 Actinidia chinensis
Ah.06g185350 Amaranthus hybridus
Ah.06g185370 Amaranthus hybridus
AL8G19850 Arabidopsis lyrata
Aqoxy1G00505 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7WS5BD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.946FET Arachis hypogaea
AT5G47860 Arabidopsis thaliana
ATR0582G342 Amborella trichopoda
Atru.chr12.1489 Acer truncatum
AUR62019578 Chenopodium quinoa
AUR62042784 Chenopodium quinoa
BolC7t44395H Brassica oleracea
BraA06t26866Z Brassica rapa
C07p38760 Brassica napus
CAN.G282.72 Capsicum annuum
CANSAT56G1851 Cannabis sativa
CARHR184430 Cardamine hirsuta
Carub.0008s0731 Capsella rubella
Ca_22545_v3 Cicer arietinum L.
Cc11_g14820 Coffea canephora
CDE02G3075 Ceratophyllum demersum
CDE06G1414 Ceratophyllum demersum
Cfa012833 Carpinus fangiana
Ciclev10028467m.g Citrus clementina
CiPaw.05G096500 Carya illinoinensis
ClCG10G013170 Citrullus lanatus
COL.COLO4_04222 Corchorus olitorius
COL.COLO4_06172 Corchorus olitorius
Cpa.g.sc102.15 Carica papaya
Cre01.g000900 Chlamydomonas reinhardtii
CsaV3_3G043440 Cucumis sativus L.
CSS0012960 Camellia sinensis var. sinensis
CSS0026733 Camellia sinensis var. sinensis
CSS0041530 Camellia sinensis var. sinensis
CSS0045913 Camellia sinensis var. sinensis
DCAR_006993 Daucus carota
Dinv07612 Davidia involucrata
Duzib147G0525 Durio zibethinus
ECA246G5024 Erigeron canadensis
EL10Ac4g08348 Beta vulgaris
Eucgr.B03577 Eucalyptus grandis
FAN07G2431 Fragaria x ananassa
FAN12G1445 Fragaria x ananassa
FvH4_4g21940 Fragaria vesca
Glyma.08G265400 Glycine max
Gohir.A09G003100 Gossypium hirsutum
Gohir.A12G086500 Gossypium hirsutum
Gohir.D09G002900 Gossypium hirsutum
Gohir.D12G085100 Gossypium hirsutum
Gorai.006G003600 Gossypium raimondii
Gorai.008G095500 Gossypium raimondii
GSVIVG01001142001 Vitis vinifera
HanXRQChr06g0175331 Helianthus annuus
HanXRQChr17g0540591 Helianthus annuus
Haze_12546 Corylus avellana
Hma1.2p1_0562F.1_g179030 Hydrangea macrophylla
Hma1.2p1_1356F.1_g277870 Hydrangea macrophylla
Hma1.2p1_1356F.1_g277880 Hydrangea macrophylla
Hma1.2p1_1356F.1_g277890 Hydrangea macrophylla
HPP92_001278 Vanilla planifolia
Hund00002 Selenicereus undatus
Lalb_Chr16g0391881 Lupinus albus
Lj3A1079G52 Lonicera japonica
Lj3C1079G16 Lonicera japonica
Lj4g0000342 Lotus japonicus
Lsat_1_v5_gn_1_109040 Lactuca sativa
Lsat_1_v5_gn_3_33381 Lactuca sativa
Lsat_1_v5_gn_5_29241 Lactuca sativa
Lsat_1_v5_gn_7_17261 Lactuca sativa
Manes.08G097800 Manihot esculenta
MBI07_g41256_MAGBIO Magnolia biondii
MCO06G181 Micromonas commoda
MCO11G811 Micromonas commoda
MD13G1135500 Malus domestica
MD16G1131100 Malus domestica
Medtr8g070480 Medicago truncatula
MELO3C026759.2 Cucumis melo
Migut.H01175 Erythranthe guttata
Migut.H01176 Erythranthe guttata
Migut.H01177 Erythranthe guttata
Migut.K01148 Erythranthe guttata
MSTRG.8073 Avicennia marina
Nitab4.5_0000069g0470 Nicotiana tabacum
Nitab4.5_0002199g0020 Nicotiana tabacum
Nn4g22038 Nelumbo nucifera
Oeu056144.2 Olea europaea
Os04g0405600 Oryza sativa ssp. japonica
Peaxi162Scf00097g01214 Petunia axillaris
PGR102G0450 Punica granatum
PGSC0003DMG401016404 Solanum tuberosum
Phvul.003G273800 Phaseolus vulgaris
Potri.001G072400 Populus trichocarpa
Potri.003G158400 Populus trichocarpa
Pp3c24_14070 Physcomitrium patens
PRCOL_00002187 Prasinoderma coloniale
PRCOL_00005115 Prasinoderma coloniale
PRCOL_00005610 Prasinoderma coloniale
Prupe.1G209800 Prunus persica
Psat5g190800 Pisum sativum
PSO017G0169 Papaver somniferum
PSO478G1012 Papaver somniferum
QL03p046965 Quercus lobata
RcHm_v2.0_Chr4g0428161 Rosa chinensis
Rhsim12G0090600 Rhododendron simsii
Sabra01G0051000 Salix brachista
Sabra03G0114800 Salix brachista
Sc11g0000020 Simmondsia chinensis
Sed0000271 Sechium edule
Sed0002782 Sechium edule
SEGI_07632 Sequoiadendron giganteum
SGA_v2.0_scaffold258G45750 Striga asiatica
SMO145G0091 Selaginella moellendorffii
Solyc01g008070.3 Solanum lycopersicum
Sopen01g003630 Solanum pennellii
Sp2g18360 Schrenkiella parvula
TAR371G0853 Trochodendron aralioides
TAR627G0548 Trochodendron aralioides
THA.LOC104807194 Tarenaya hassleriana
Thecc.01G233000 Theobroma cacao
Thhalv10004270m.g Eutrema salsugineum
TPR.G6140 Trifolium pratense
TWI36G0919 Tripterygium wilfordii
unitig_747.g21105 Utricularia gibba
vmacro15979 Vaccinium macrocarpon
VMungo0251G3786 Vigna mungo
Zm00001eb084350 Zea mays

User provided reference genes

Program Settings