Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p21210 Brassica napus
Aa31LG10G5610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1081 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1273 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1443 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4472 Anthoceros agrestis
Actinidia02521 Actinidia chinensis
AL1G54700 Arabidopsis lyrata
Aqoxy2G02563 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7BH383 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BM2Q5K Arachis hypogaea
AT1G48130 Arabidopsis thaliana
ATR0796G055 Amborella trichopoda
Atru.chr4.3125 Acer truncatum
AUR62002570 Chenopodium quinoa
AUR62029991 Chenopodium quinoa
BcaB02g10720 Brassica carinata
BcaC01g01496 Brassica carinata
BcaC05g27595 Brassica carinata
BolC5t32296H Brassica oleracea
BolC6t37315H Brassica oleracea
BraA05t20750Z Brassica rapa
BraA05t21027Z Brassica rapa
C05p35800 Brassica napus
C06p21300 Brassica napus
CAN.G546.41 Capsicum annuum
CANSAT78G1051 Cannabis sativa
CARHR037770 Cardamine hirsuta
Carub.0001s3723 Capsella rubella
Ca_18238_v3 Cicer arietinum L.
CBR_g8949 Chara braunii
Cc03_g00310 Coffea canephora
CDE02G0842 Ceratophyllum demersum
Cfa015714 Carpinus fangiana
Cfa026758 Carpinus fangiana
Ciclev10007138m.g Citrus clementina
ClCG05G006800 Citrullus lanatus
COL.COLO4_34540 Corchorus olitorius
Cpa.g.sc146.45 Carica papaya
CsaV3_3G015450 Cucumis sativus L.
CSS0012631 Camellia sinensis var. sinensis
DCAR_023383 Daucus carota
Dinv29531 Davidia involucrata
Duzib128G0500 Durio zibethinus
Duzib128G2054 Durio zibethinus
Duzib212G0439 Durio zibethinus
Duzib212G0534 Durio zibethinus
ECA233G5395 Erigeron canadensis
EL10Ac3g06274 Beta vulgaris
Eucgr.G02036 Eucalyptus grandis
FAN17G1815 Fragaria x ananassa
FvH4_4g21120 Fragaria vesca
Glyma.05G133466 Glycine max
Glyma.05G133500 Glycine max
Glyma.08G088000 Glycine max
Gohir.A10G176000 Gossypium hirsutum
Gohir.D01G126866 Gossypium hirsutum
Gohir.D10G182600 Gossypium hirsutum
Gorai.001G249700 Gossypium raimondii
Gorai.002G157500 Gossypium raimondii
Gorai.011G204600 Gossypium raimondii
GSVIVG01017665001 Vitis vinifera
GSVIVG01017666001 Vitis vinifera
GSVIVG01034909001 Vitis vinifera
HanXRQChr07g0194341 Helianthus annuus
Haze_00800 Corylus avellana
Haze_27189 Corylus avellana
HPP92_020535 Vanilla planifolia
Lalb_Chr07g0188301 Lupinus albus
Lalb_Chr13g0293491 Lupinus albus
Lalb_Chr13g0293501 Lupinus albus
Lj4g0025954 Lotus japonicus
Lj6A699T60 Lonicera japonica
Lsat_1_v5_gn_6_69481 Lactuca sativa
Manes.03G210400 Manihot esculenta
Manes.15G003600 Manihot esculenta
Mapoly0042s0090 Marchantia polymorpha
Mapoly0057s0102 Marchantia polymorpha
MBI18_g28902_MAGBIO Magnolia biondii
MD13G1144500 Malus domestica
MD16G1139600 Malus domestica
Medtr4g094720 Medicago truncatula
MELO3C006744.2 Cucumis melo
Migut.G00012 Erythranthe guttata
Migut.O00392 Erythranthe guttata
Nitab4.5_0000204g0010 Nicotiana tabacum
Nitab4.5_0000781g0010 Nicotiana tabacum
Nn1g05419 Nelumbo nucifera
Nn1g05808 Nelumbo nucifera
Nn3g21870 Nelumbo nucifera
Nn4g25416 Nelumbo nucifera
Nn5g30197 Nelumbo nucifera
Oeu020283.1 Olea europaea
Os07g0638300 Oryza sativa ssp. japonica
Os07g0638400 Oryza sativa ssp. japonica
Peaxi162Scf00103g01922 Petunia axillaris
PGR031G1426 Punica granatum
PGSC0003DMG400027720 Solanum tuberosum
Phvul.002G189300 Phaseolus vulgaris
Potri.008G099900 Populus trichocarpa
Pp3c10_21340 Physcomitrium patens
Pp3c20_21100 Physcomitrium patens
Pp3c22_8470 Physcomitrium patens
PRCOL_00004927 Prasinoderma coloniale
Prupe.1G109000 Prunus persica
Psat7g085840 Pisum sativum
PSO144G0010 Papaver somniferum
PSO210G5602 Papaver somniferum
PSO761G0261 Papaver somniferum
QL06p013713 Quercus lobata
RcHm_v2.0_Chr4g0426681 Rosa chinensis
Rhsim02G0000600 Rhododendron simsii
Sabra08G0075600 Salix brachista
SalBow8G2871 Salvia bowleyana
Sc24g0001290 Simmondsia chinensis
SEGI_03003 Sequoiadendron giganteum
SEGI_14508 Sequoiadendron giganteum
SGA_v2.0_scaffold64G22045 Striga asiatica
SMO147G0228 Selaginella moellendorffii
SMO367G0796 Selaginella moellendorffii
Solyc03g096040.3 Solanum lycopersicum
Sopen03g026120 Solanum pennellii
Sp1g35100 Schrenkiella parvula
TAR362G0466 Trochodendron aralioides
THA.LOC104821806 Tarenaya hassleriana
Thecc.04G309900 Theobroma cacao
Thhalv10012121m.g Eutrema salsugineum
TPR.G31247 Trifolium pratense
TWI09G1588 Tripterygium wilfordii
VMungo0251G0059 Vigna mungo
Zm00001eb328770 Zea mays

User provided reference genes

Program Settings