Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p20580 Brassica napus
Aa31LG2G12890 Aethionema arabicum
Actinidia02144 Actinidia chinensis
Actinidia02145 Actinidia chinensis
Actinidia14414 Actinidia chinensis
Actinidia14415 Actinidia chinensis
Ah.12g054210 Amaranthus hybridus
AL7G38030 Arabidopsis lyrata
Aqoxy5G03845 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0NSC2B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NE97L5 Arachis hypogaea
AT4G16700 Arabidopsis thaliana
ATR0317G025 Amborella trichopoda
Atru.chr9.1290 Acer truncatum
AUR62007103 Chenopodium quinoa
AUR62019966 Chenopodium quinoa
BcaC02g09018 Brassica carinata
BcaC02g09019 Brassica carinata
BcaC03g14714 Brassica carinata
BcaC03g14715 Brassica carinata
BcaC07g38425 Brassica carinata
BcaC07g42540 Brassica carinata
BcaC09g50403 Brassica carinata
BcaNung00159 Brassica carinata
BolC1t02533H Brassica oleracea
BolC2t08295H Brassica oleracea
BolC4t25536H Brassica oleracea
BolC4t25537H Brassica oleracea
BraA01t01986Z Brassica rapa
BraA03t09785Z Brassica rapa
BraA08t34844Z Brassica rapa
C01p25880 Brassica napus
C02p21550 Brassica napus
C04p39670 Brassica napus
C09p44540 Brassica napus
CAN.G62.33 Capsicum annuum
CANSAT21G0098 Cannabis sativa
CARHR223230 Cardamine hirsuta
Carub.0007s2469 Capsella rubella
Ca_24588_v3 Cicer arietinum L.
CBR_g40206 Chara braunii
Cc08_g12250 Coffea canephora
CDE04G0678 Ceratophyllum demersum
CDE04G1583 Ceratophyllum demersum
Cfa023268 Carpinus fangiana
Ciclev10020120m.g Citrus clementina
CiPaw.11G080800 Carya illinoinensis
ClCG01G004150 Citrullus lanatus
COL.COLO4_37146 Corchorus olitorius
Cpa.g.sc29.178 Carica papaya
CsaV3_5G004310 Cucumis sativus L.
CSS0015193 Camellia sinensis var. sinensis
DCAR_004965 Daucus carota
Dinv21647 Davidia involucrata
Duzib084G0278 Durio zibethinus
Duzib205G1394 Durio zibethinus
ECA233G1798 Erigeron canadensis
EL10Ac5g12377 Beta vulgaris
Eucgr.E00410 Eucalyptus grandis
FAN04G1995 Fragaria x ananassa
FAN08G1502 Fragaria x ananassa
FAN13G0557 Fragaria x ananassa
FAN18G0274 Fragaria x ananassa
FvH4_5g19150 Fragaria vesca
Glyma.01G207800 Glycine max
Glyma.11G034500 Glycine max
Gohir.A03G007500 Gossypium hirsutum
Gohir.D03G163500 Gossypium hirsutum
Gorai.003G172200 Gossypium raimondii
GSVIVG01004724001 Vitis vinifera
HanXRQChr16g0510961 Helianthus annuus
Haze_01067 Corylus avellana
Haze_01069 Corylus avellana
Hma1.2p1_0316F.1_g122960 Hydrangea macrophylla
HPP92_015120 Vanilla planifolia
Hund14571 Selenicereus undatus
Lalb_Chr05g0214371 Lupinus albus
Lj2A220G36 Lonicera japonica
Lj2A220G37 Lonicera japonica
Lj2g0002324 Lotus japonicus
Lsat_1_v5_gn_4_25380 Lactuca sativa
Lsat_1_v5_gn_6_18021 Lactuca sativa
Manes.01G082200 Manihot esculenta
Mapoly0144s0014 Marchantia polymorpha
MBI04_g09520_MAGBIO Magnolia biondii
MD06G1055900 Malus domestica
Medtr5g012880 Medicago truncatula
MELO3C005523.2 Cucumis melo
Migut.A01119 Erythranthe guttata
Nitab4.5_0000618g0100 Nicotiana tabacum
Nitab4.5_0001076g0010 Nicotiana tabacum
Nn1g00952 Nelumbo nucifera
Os03g0101900 Oryza sativa ssp. japonica
Peaxi162Scf01022g00324 Petunia axillaris
PGR042G2168 Punica granatum
PGSC0003DMG402011882 Solanum tuberosum
Phvul.002G057200 Phaseolus vulgaris
Potri.003G078300 Populus trichocarpa
Pp3c10_660 Physcomitrium patens
Prupe.5G066800 Prunus persica
Psat2g176840 Pisum sativum
PSO170G1657 Papaver somniferum
PSO357G0330 Papaver somniferum
QL12p011684 Quercus lobata
RcHm_v2.0_Chr7g0203641 Rosa chinensis
RcHm_v2.0_Chr7g0203671 Rosa chinensis
Rhsim01G0100800 Rhododendron simsii
Sabra03G0048600 Salix brachista
SalBow6G6019 Salvia bowleyana
Sc01g0008340 Simmondsia chinensis
Sed0010070 Sechium edule
Sed0018188 Sechium edule
SEGI_17682 Sequoiadendron giganteum
SEGI_40136 Sequoiadendron giganteum
SEGI_40726 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30169 Striga asiatica
SHI02535 Sapria himalayana
SMO351G0559 Selaginella moellendorffii
Solyc06g060780.4 Solanum lycopersicum
Sopen06g020900 Solanum pennellii
Sp7g15340 Schrenkiella parvula
TAR713G0001 Trochodendron aralioides
THA.LOC104815498 Tarenaya hassleriana
Thecc.03G249100 Theobroma cacao
Thhalv10025592m.g Eutrema salsugineum
TPR.G18111 Trifolium pratense
TWI15G0813 Tripterygium wilfordii
unitig_744.g24471 Utricularia gibba
vmacro00190 Vaccinium macrocarpon
vmacro00191 Vaccinium macrocarpon
VMungo1215G0088 Vigna mungo

User provided reference genes

Program Settings