Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p10880 Brassica napus
Aa31LG9G16240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.643 Anthoceros agrestis
Actinidia31362 Actinidia chinensis
Actinidia34692 Actinidia chinensis
Ah.04g164550 Amaranthus hybridus
AL1G45360 Arabidopsis lyrata
Aqoxy4G01838 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GTY4NG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N7CMLX Arachis hypogaea
AT1G30950 Arabidopsis thaliana
ATR0561G071 Amborella trichopoda
ATR0763G218 Amborella trichopoda
Atru.chr10.318 Acer truncatum
Atru.chr10.348 Acer truncatum
AUR62019478 Chenopodium quinoa
AUR62036157 Chenopodium quinoa
BcaB04g18196 Brassica carinata
BcaC07g37791 Brassica carinata
BolC8t48184H Brassica oleracea
BraA08t33083Z Brassica rapa
CAN.G809.67 Capsicum annuum
CANSAT35G0189 Cannabis sativa
CARHR030490 Cardamine hirsuta
Carub.0001s2936 Capsella rubella
Ca_18233_v3 Cicer arietinum L.
Cc09_g05180 Coffea canephora
CDE02G3409 Ceratophyllum demersum
CDE05G2584 Ceratophyllum demersum
Cfa001126 Carpinus fangiana
Ciclev10017846m.g Citrus clementina
CiPaw.09G137800 Carya illinoinensis
CiPaw.10G105300 Carya illinoinensis
ClCG03G004180 Citrullus lanatus
COL.COLO4_18031 Corchorus olitorius
CsaV3_1G010110 Cucumis sativus L.
CSS0018053 Camellia sinensis var. sinensis
DCAR_001268 Daucus carota
DCAR_001269 Daucus carota
DCAR_001274 Daucus carota
Dinv26294 Davidia involucrata
Dinv26316 Davidia involucrata
Duzib132G1078 Durio zibethinus
ECA232G4918 Erigeron canadensis
EL10Ac4g08245 Beta vulgaris
Eucgr.E04314 Eucalyptus grandis
FAN09G4208 Fragaria x ananassa
FAN11G3762 Fragaria x ananassa
FAN14G0792 Fragaria x ananassa
FAN16G0144 Fragaria x ananassa
FAN21G3750 Fragaria x ananassa
FAN25G0244 Fragaria x ananassa
FvH4_3g03990 Fragaria vesca
FvH4_3g12960 Fragaria vesca
FvH4_6g06880 Fragaria vesca
Glyma.05G134000 Glycine max
Glyma.08G088700 Glycine max
Gohir.A01G127700 Gossypium hirsutum
Gohir.D01G114480 Gossypium hirsutum
Gorai.002G139700 Gossypium raimondii
GSVIVG01012147001 Vitis vinifera
HanXRQChr09g0257841 Helianthus annuus
Haze_05266 Corylus avellana
Hma1.2p1_0185F.1_g081460 Hydrangea macrophylla
HPP92_028074 Vanilla planifolia
HPP92_028075 Vanilla planifolia
Lalb_Chr12g0209141 Lupinus albus
Lalb_Chr13g0293451 Lupinus albus
Lj1P1149T39 Lonicera japonica
Lj4g0026547 Lotus japonicus
Lsat_1_v5_gn_8_106861 Lactuca sativa
Lsat_1_v5_gn_8_106881 Lactuca sativa
Manes.13G079162 Manihot esculenta
Mapoly0045s0086 Marchantia polymorpha
MBI02_g01130_MAGBIO Magnolia biondii
MD05G1246800 Malus domestica
MD10G1227400 Malus domestica
Medtr4g094748 Medicago truncatula
Medtr6g010820 Medicago truncatula
MELO3C002401.2 Cucumis melo
Migut.M02009 Erythranthe guttata
Nitab4.5_0006794g0010 Nicotiana tabacum
Nitab4.5_0013176g0010 Nicotiana tabacum
Nn7g38331 Nelumbo nucifera
Oeu056060.1 Olea europaea
Os06g0665400 Oryza sativa ssp. japonica
Peaxi162Scf00048g00175 Petunia axillaris
PGR042G0935 Punica granatum
PGSC0003DMG400017736 Solanum tuberosum
Phvul.002G188300 Phaseolus vulgaris
Potri.001G160900 Populus trichocarpa
Potri.003G074100 Populus trichocarpa
Pp3c11_9730 Physcomitrium patens
Pp3c8_16350 Physcomitrium patens
Prupe.4G117600 Prunus persica
Prupe.4G117800 Prunus persica
Psat7g088280 Pisum sativum
PSO541G0153 Papaver somniferum
PSO675G7102 Papaver somniferum
QL11p012250 Quercus lobata
RcHm_v2.0_Chr3g0456371 Rosa chinensis
RcHm_v2.0_Chr5g0021071 Rosa chinensis
Rhsim02G0171300 Rhododendron simsii
Sabra01G0131400 Salix brachista
Sabra03G0044600 Salix brachista
SalBow8G5618 Salvia bowleyana
Sc24g0003010 Simmondsia chinensis
Sc24g0003020 Simmondsia chinensis
Sed0013480 Sechium edule
SEGI_07480 Sequoiadendron giganteum
SEGI_23824 Sequoiadendron giganteum
SEGI_29009 Sequoiadendron giganteum
SEGI_31862 Sequoiadendron giganteum
SGA_v2.0_scaffold175G39328 Striga asiatica
SHI24793 Sapria himalayana
SMO351G0091 Selaginella moellendorffii
Solyc02g081670.1 Solanum lycopersicum
Sopen02g026280 Solanum pennellii
Sp1g26810 Schrenkiella parvula
TAR629G1278 Trochodendron aralioides
THA.LOC104798568 Tarenaya hassleriana
Thecc.02G004000 Theobroma cacao
Thhalv10009319m.g Eutrema salsugineum
TPR.G23831 Trifolium pratense
TPR.G25897 Trifolium pratense
TWI73G0225 Tripterygium wilfordii
unitig_37.g12047 Utricularia gibba
vmacro11018 Vaccinium macrocarpon
VMungo0251G1017 Vigna mungo
Zm00001eb274390 Zea mays
Zm00001eb389810 Zea mays

User provided reference genes

Program Settings