Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p22560 Brassica napus
A05p16900 Brassica napus
A05p16910 Brassica napus
Aa31LG9G2330 Aethionema arabicum
Actinidia28072 Actinidia chinensis
Ah.12g057320 Amaranthus hybridus
AL7G40820 Arabidopsis lyrata
Aqoxy3G01225 Aquilegia oxysepala
Aqoxy4G02449 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.41EE5L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9A5XZY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G2100B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UKM804 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YJH68W Arachis hypogaea
AT4G15010 Arabidopsis thaliana
ATR0174G007 Amborella trichopoda
ATR0594G009 Amborella trichopoda
Atru.chr12.548 Acer truncatum
BcaB02g07844 Brassica carinata
BcaC08g44257 Brassica carinata
BcaC09g50180 Brassica carinata
BcaNung00313 Brassica carinata
BolC1t02740H Brassica oleracea
BolC6t36864H Brassica oleracea
BraA01t02169Z Brassica rapa
BraA05t20595Z Brassica rapa
C01p28060 Brassica napus
C06p16620 Brassica napus
CAN.G1513.3 Capsicum annuum
CAN.G1940.2 Capsicum annuum
CAN.G2846.2 Capsicum annuum
CAN.G730.12 Capsicum annuum
CAN.G730.13 Capsicum annuum
CAN.G730.17 Capsicum annuum
CAN.G730.21 Capsicum annuum
CAN.G730.4 Capsicum annuum
CANSAT80G0182 Cannabis sativa
CARHR221700 Cardamine hirsuta
Carub.0007s2708 Capsella rubella
Ca_18332_v3 Cicer arietinum L.
CBR_g51824 Chara braunii
Cc02_g21900 Coffea canephora
Cc02_g21910 Coffea canephora
CDE04G1870 Ceratophyllum demersum
CDE08G1644 Ceratophyllum demersum
Cfa019136 Carpinus fangiana
Ciclev10031864m.g Citrus clementina
CiPaw.11G025800 Carya illinoinensis
ClCG05G021510 Citrullus lanatus
COL.COLO4_10011 Corchorus olitorius
COL.COLO4_10012 Corchorus olitorius
COL.COLO4_27930 Corchorus olitorius
COL.COLO4_29892 Corchorus olitorius
Cpa.g.c40727 Carica papaya
Cpa.g.sc36.20 Carica papaya
CsaV3_5G035730 Cucumis sativus L.
CSS0039579 Camellia sinensis var. sinensis
DCAR_006139 Daucus carota
Duzib106G0263 Durio zibethinus
ECA236G4176 Erigeron canadensis
EL10Ac5g12767 Beta vulgaris
Eucgr.H00021 Eucalyptus grandis
FAN07G1127 Fragaria x ananassa
FAN12G3642 Fragaria x ananassa
FAN17G2742 Fragaria x ananassa
FAN22G0246 Fragaria x ananassa
FvH4_4g29980 Fragaria vesca
Glyma.05G120600 Glycine max
Glyma.08G075400 Glycine max
Gohir.A06G170300 Gossypium hirsutum
Gohir.D06G178100 Gossypium hirsutum
Gorai.N007100 Gossypium raimondii
GSVIVG01020853001 Vitis vinifera
HanXRQChr11g0337671 Helianthus annuus
HanXRQChr15g0481161 Helianthus annuus
Haze_07503 Corylus avellana
HPP92_021056 Vanilla planifolia
Lalb_Chr12g0208521 Lupinus albus
Lj4g0025997 Lotus japonicus
Lj9A317T77 Lonicera japonica
Lsat_1_v5_gn_7_80540 Lactuca sativa
Manes.16G061300 Manihot esculenta
Mapoly0188s0014 Marchantia polymorpha
MBI03_g03956_MAGBIO Magnolia biondii
MD13G1062400 Malus domestica
MD16G1060700 Malus domestica
Medtr4g094305 Medicago truncatula
MELO3C012375.2 Cucumis melo
Migut.N01012 Erythranthe guttata
MSTRG.27825 Avicennia marina
Nitab4.5_0000718g0290 Nicotiana tabacum
Nitab4.5_0012898g0010 Nicotiana tabacum
Nn6g35524 Nelumbo nucifera
Oeu017286.1 Olea europaea
Os04g0527500 Oryza sativa ssp. japonica
Peaxi162Scf00152g01221 Petunia axillaris
PGR142G0064 Punica granatum
Phvul.002G206200 Phaseolus vulgaris
Potri.001G222400 Populus trichocarpa
Pp3c15_20500 Physcomitrium patens
Pp3c18_6530 Physcomitrium patens
Prupe.1G287600 Prunus persica
Psat0s2194g0120 Pisum sativum
PSO063G2120 Papaver somniferum
PSO782G4197 Papaver somniferum
QL04p050517 Quercus lobata
RcHm_v2.0_Chr4g0438261 Rosa chinensis
Rhsim05G0111400 Rhododendron simsii
Sabra16G0132100 Salix brachista
SalBow6G6672 Salvia bowleyana
Sc22g0000350 Simmondsia chinensis
Sed0010539 Sechium edule
SEGI_29488 Sequoiadendron giganteum
SGA_v2.0_scaffold145G36053 Striga asiatica
SHI11404 Sapria himalayana
SHI11406 Sapria himalayana
Solyc11g007070.2 Solanum lycopersicum
Sopen11g002990 Solanum pennellii
Sp7g13170 Schrenkiella parvula
SpUn0490_0010 Schrenkiella parvula
TAR375G0890 Trochodendron aralioides
THA.LOC104808523 Tarenaya hassleriana
Thecc.04G023500 Theobroma cacao
Thecc.10G118600 Theobroma cacao
Thhalv10025456m.g Eutrema salsugineum
TPR.G31487 Trifolium pratense
TWI73G1071 Tripterygium wilfordii
unitig_747.g21237 Utricularia gibba
vmacro19910 Vaccinium macrocarpon
VMungo0251G2526 Vigna mungo
Zm00001eb076720 Zea mays
Zm00001eb427070 Zea mays

User provided reference genes

Program Settings