Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia23945 Actinidia chinensis
Aqoxy2G02105 Aquilegia oxysepala
Aqoxy4G02913 Aquilegia oxysepala
ATR0559G028 Amborella trichopoda
Atru.chr3.3892 Acer truncatum
Atru.chr8.1967 Acer truncatum
CANSAT54G2543 Cannabis sativa
Ca_28209_v3 Cicer arietinum L.
Cfa011491 Carpinus fangiana
Cfa017389 Carpinus fangiana
Ciclev10029478m.g Citrus clementina
CiPaw.09G192100 Carya illinoinensis
CiPaw.13G095300 Carya illinoinensis
CiPaw.14G068900 Carya illinoinensis
ClCG03G001590 Citrullus lanatus
COL.COLO4_18500 Corchorus olitorius
Cpa.g.sc81.161 Carica papaya
CsaV3_1G034090 Cucumis sativus L.
CSS0006279 Camellia sinensis var. sinensis
CSS0050426 Camellia sinensis var. sinensis
CSS0050430 Camellia sinensis var. sinensis
DCAR_005325 Daucus carota
DCAR_005974 Daucus carota
DCAR_020849 Daucus carota
DCAR_023725 Daucus carota
Dinv12413 Davidia involucrata
Dinv16991 Davidia involucrata
Dinv37179 Davidia involucrata
Dinv39738 Davidia involucrata
Dinv42940 Davidia involucrata
Dinv43160 Davidia involucrata
Duzib093G0486 Durio zibethinus
Duzib106G1613 Durio zibethinus
Duzib150G1094 Durio zibethinus
Duzib168G1635 Durio zibethinus
Duzib170G1125 Durio zibethinus
EL10As1g23034 Beta vulgaris
Eucgr.A01260 Eucalyptus grandis
Eucgr.B02374 Eucalyptus grandis
FAN11G1916 Fragaria x ananassa
FAN16G3022 Fragaria x ananassa
FAN21G3710 Fragaria x ananassa
FAN25G3118 Fragaria x ananassa
FvH4_3g35950 Fragaria vesca
Glyma.08G358900 Glycine max
Glyma.13G335500 Glycine max
Glyma.15G038800 Glycine max
Glyma.18G177800 Glycine max
Gohir.A01G222700 Gossypium hirsutum
Gohir.A03G037600 Gossypium hirsutum
Gohir.A04G082200 Gossypium hirsutum
Gohir.A07G098000 Gossypium hirsutum
Gohir.D01G212200 Gossypium hirsutum
Gohir.D03G126300 Gossypium hirsutum
Gohir.D04G121000 Gossypium hirsutum
Gohir.D07G102400 Gossypium hirsutum
Gorai.001G110300 Gossypium raimondii
Gorai.002G258000 Gossypium raimondii
Gorai.003G132600 Gossypium raimondii
Gorai.012G103600 Gossypium raimondii
Haze_20783 Corylus avellana
Haze_24086 Corylus avellana
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla
Lalb_Chr01g0003691 Lupinus albus
Lalb_Chr03g0026661 Lupinus albus
Lj3g0001714 Lotus japonicus
Lj3g0014047 Lotus japonicus
Manes.04G034400 Manihot esculenta
Manes.09G089000 Manihot esculenta
Manes.11G131200 Manihot esculenta
MBI05_g30241_MAGBIO Magnolia biondii
MD03G1095400 Malus domestica
MD11G1110400 Malus domestica
MD12G1140600 Malus domestica
Medtr4g021870 Medicago truncatula
Medtr4g063885 Medicago truncatula
Medtr7g060440 Medicago truncatula
MELO3C020645.2 Cucumis melo
Migut.J00334 Erythranthe guttata
Migut.N02671 Erythranthe guttata
MSTRG.19086 Avicennia marina
MSTRG.5669 Avicennia marina
Nitab4.5_0004094g0010 Nicotiana tabacum
Nn2g10378 Nelumbo nucifera
Nn5g26925 Nelumbo nucifera
Oeu007791.1 Olea europaea
Oeu011403.1 Olea europaea
Oeu019207.1 Olea europaea
Oeu024352.1 Olea europaea
Oeu036150.1 Olea europaea
Oeu036152.1 Olea europaea
Oeu038352.1 Olea europaea
Oeu054156.1 Olea europaea
Peaxi162Scf00679g00042 Petunia axillaris
PGR004G0898 Punica granatum
Phvul.008G100200 Phaseolus vulgaris
Phvul.L004943 Phaseolus vulgaris
Potri.001G239000 Populus trichocarpa
Potri.006G084700 Populus trichocarpa
Potri.009G030200 Populus trichocarpa
Prupe.6G078900 Prunus persica
Prupe.6G254000 Prunus persica
Psat0s8791g0040 Pisum sativum
Psat3g141040 Pisum sativum
Psat7g217000 Pisum sativum
QL01p032269 Quercus lobata
QL07p048152 Quercus lobata
RcHm_v2.0_Chr5g0064301 Rosa chinensis
Rhsim01G0227100 Rhododendron simsii
Rhsim05G0192000 Rhododendron simsii
Sabra09G0021100 Salix brachista
Sabra16G0144100 Salix brachista
SalBow3G2287 Salvia bowleyana
SalBow4G0071 Salvia bowleyana
Sc01g0004310 Simmondsia chinensis
Sed0015612 Sechium edule
SGA_v2.0_scaffold126G33790 Striga asiatica
TAR623G0987 Trochodendron aralioides
Thecc.05G040600 Theobroma cacao
Thecc.09G322800 Theobroma cacao
TPR.G14476 Trifolium pratense
TPR.G23268 Trifolium pratense
TPR.G5598 Trifolium pratense
TWI31G0692 Tripterygium wilfordii
TWI53G1171 Tripterygium wilfordii
TWI79G0544 Tripterygium wilfordii
vmacro20146 Vaccinium macrocarpon
VMungo0251G0728 Vigna mungo
VMungo1080G1048 Vigna mungo
VMungo1309G2816 Vigna mungo
VMungo1383G3210 Vigna mungo

User provided reference genes

Program Settings