Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG5G15920 Aethionema arabicum
Actinidia21493 Actinidia chinensis
Ah.04g161100 Amaranthus hybridus
AL3G16050 Arabidopsis lyrata
AL3G16080 Arabidopsis lyrata
Aqoxy2G02987 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea
AT3G05480 Arabidopsis thaliana
ATR0796G244 Amborella trichopoda
Atru.chr2.26 Acer truncatum
AUR62000770 Chenopodium quinoa
AUR62005199 Chenopodium quinoa
BcaC05g30118 Brassica carinata
BcaC05g30164 Brassica carinata
BolC5t34833H Brassica oleracea
BraA05t19070Z Brassica rapa
BraA05t23035Z Brassica rapa
C05p61750 Brassica napus
CAN.G1.32 Capsicum annuum
CARHR079860 Cardamine hirsuta
CARHR079870 Cardamine hirsuta
Carub.0003s0477 Capsella rubella
Ca_05803_v3 Cicer arietinum L.
CBR_g180 Chara braunii
Cc02_g33090 Coffea canephora
CDE02G1352 Ceratophyllum demersum
Cfa006624 Carpinus fangiana
Ciclev10001128m.g Citrus clementina
CiPaw.07G021000 Carya illinoinensis
ClCG02G015450 Citrullus lanatus
COL.COLO4_10514 Corchorus olitorius
Cpa.g.sc48.91 Carica papaya
Cre16.g682950 Chlamydomonas reinhardtii
CsaV3_2G006620 Cucumis sativus L.
CSS0001755 Camellia sinensis var. sinensis
DCAR_003352 Daucus carota
Dinv40342 Davidia involucrata
ECA246G4331 Erigeron canadensis
EL10Ac4g09921 Beta vulgaris
Eucgr.H04531 Eucalyptus grandis
Eucgr.H04556 Eucalyptus grandis
Eucgr.H04558 Eucalyptus grandis
Eucgr.H04569 Eucalyptus grandis
Eucgr.H04571 Eucalyptus grandis
Eucgr.H04573 Eucalyptus grandis
Eucgr.H04575 Eucalyptus grandis
Eucgr.H04576 Eucalyptus grandis
FAN02G0246 Fragaria x ananassa
FAN05G3147 Fragaria x ananassa
FAN14G0885 Fragaria x ananassa
FvH4_6g06510 Fragaria vesca
Glyma.03G236100 Glycine max
Glyma.19G233800 Glycine max
Gohir.A11G267700 Gossypium hirsutum
Gohir.D11G277600 Gossypium hirsutum
Gorai.007G299800 Gossypium raimondii
GSVIVG01031150001 Vitis vinifera
HanXRQChr03g0072661 Helianthus annuus
HanXRQChr03g0072671 Helianthus annuus
Haze_04144 Corylus avellana
Haze_04145 Corylus avellana
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla
HPP92_000400 Vanilla planifolia
HPP92_000403 Vanilla planifolia
Hund07094 Selenicereus undatus
Lalb_Chr18g0045721 Lupinus albus
Lj1g0019406 Lotus japonicus
Lj9A144T46 Lonicera japonica
Lsat_1_v5_gn_9_124801 Lactuca sativa
Manes.08G118100 Manihot esculenta
Mapoly0078s0014 Marchantia polymorpha
MBI19_g29225_MAGBIO Magnolia biondii
MCO01G074 Micromonas commoda
MD04G1201200 Malus domestica
Medtr7g113100 Medicago truncatula
MELO3C031536.2 Cucumis melo
Migut.G01001 Erythranthe guttata
Migut.G01092 Erythranthe guttata
Migut.G01320 Erythranthe guttata
MSTRG.20421 Avicennia marina
Nitab4.5_0000524g0030 Nicotiana tabacum
Nitab4.5_0001057g0090 Nicotiana tabacum
Nitab4.5_0001129g0130 Nicotiana tabacum
Nn3g21434 Nelumbo nucifera
Oeu043357.2 Olea europaea
Os03g0345100 Oryza sativa ssp. japonica
Peaxi162Scf00949g00112 Petunia axillaris
PGR031G2641 Punica granatum
PGSC0003DMG400007478 Solanum tuberosum
Phvul.006G090000 Phaseolus vulgaris
Potri.013G017500 Populus trichocarpa
Pp3c15_2650 Physcomitrium patens
Pp3c7_570 Physcomitrium patens
Prupe.6G321300 Prunus persica
Psat0s4314g0040 Pisum sativum
Psat6g098120 Pisum sativum
PSO017G4250 Papaver somniferum
PSO151G0070 Papaver somniferum
QL03p021207 Quercus lobata
QL03p021253 Quercus lobata
RcHm_v2.0_Chr3g0455661 Rosa chinensis
Rhsim05G0139400 Rhododendron simsii
Sabra13G0016500 Salix brachista
Sabra13G0020500 Salix brachista
Sc16g0008610 Simmondsia chinensis
Sed0024378 Sechium edule
SEGI_33282 Sequoiadendron giganteum
SGA_v2.0_scaffold172G38992 Striga asiatica
SHI18108 Sapria himalayana
SHI32441 Sapria himalayana
SMO134G0282 Selaginella moellendorffii
SMO274G0013 Selaginella moellendorffii
Solyc10g044780.2 Solanum lycopersicum
Sopen10g013470 Solanum pennellii
Sp3g04310 Schrenkiella parvula
TAR362G0609 Trochodendron aralioides
TAR633G2454 Trochodendron aralioides
THA.LOC104818713 Tarenaya hassleriana
Thecc.05G312500 Theobroma cacao
Thecc.07G184700 Theobroma cacao
Thecc.07G184800 Theobroma cacao
Thhalv10020753m.g Eutrema salsugineum
Thhalv10022144m.g Eutrema salsugineum
TPR.G33209 Trifolium pratense
TWI12G0462 Tripterygium wilfordii
TWI56G1489 Tripterygium wilfordii
unitig_699.g19668 Utricularia gibba
vmacro19747 Vaccinium macrocarpon
VMungo0540G0496 Vigna mungo
Zm00001eb016590 Zea mays

User provided reference genes

Program Settings