Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11100 Brassica napus
A03p51750 Brassica napus
Aa31LG6G1830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis
Actinidia14743 Actinidia chinensis
Actinidia18160 Actinidia chinensis
Ah.12g055850 Amaranthus hybridus
AL7G34950 Arabidopsis lyrata
AL8G21390 Arabidopsis lyrata
Aqoxy7G00888 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea
AT4G19140 Arabidopsis thaliana
ATR0829G145 Amborella trichopoda
Atru.chr6.1471 Acer truncatum
AUR62007382 Chenopodium quinoa
AUR62018605 Chenopodium quinoa
BcaC06g30611 Brassica carinata
BcaC09g51437 Brassica carinata
BcaNung03076 Brassica carinata
BcaNung04009 Brassica carinata
BolC1t01286H Brassica oleracea
BolC7t45529H Brassica oleracea
BraA01t01056Z Brassica rapa
BraA03t14264Z Brassica rapa
C01p13130 Brassica napus
C07p50270 Brassica napus
CANSAT21G0049 Cannabis sativa
CARHR226010 Cardamine hirsuta
Carub.0007s2201 Capsella rubella
CBR_g24057 Chara braunii
Cc08_g05080 Coffea canephora
CDE12G0810 Ceratophyllum demersum
Cfa012590 Carpinus fangiana
Ciclev10002048m.g Citrus clementina
Ciclev10003484m.g Citrus clementina
CiPaw.11G103200 Carya illinoinensis
ClCG10G001030 Citrullus lanatus
Cpa.g.c47778 Carica papaya
Cpa.g.sc90.41 Carica papaya
Cpa.g.sc90.42 Carica papaya
CsaV3_3G001060 Cucumis sativus L.
CSS0036776 Camellia sinensis var. sinensis
DCAR_008183 Daucus carota
Dinv22873 Davidia involucrata
Dinv28013 Davidia involucrata
Duzib084G0482 Durio zibethinus
Duzib205G1143 Durio zibethinus
ECA240G3292 Erigeron canadensis
EL10Ac5g11971 Beta vulgaris
Eucgr.E01230 Eucalyptus grandis
Eucgr.E01239 Eucalyptus grandis
FAN04G1739 Fragaria x ananassa
FAN13G2421 Fragaria x ananassa
FAN18G2518 Fragaria x ananassa
FAN18G4345 Fragaria x ananassa
FvH4_5g23960 Fragaria vesca
Glyma.01G149400 Glycine max
Glyma.09G213600 Glycine max
Gohir.A03G000012 Gossypium hirsutum
Gohir.A08G150100 Gossypium hirsutum
Gohir.D03G177900 Gossypium hirsutum
Gohir.D08G171200 Gossypium hirsutum
Gorai.003G187200 Gossypium raimondii
Gorai.004G178600 Gossypium raimondii
GSVIVG01022785001 Vitis vinifera
HanXRQChr03g0081171 Helianthus annuus
HanXRQChr13g0412031 Helianthus annuus
Haze_05991 Corylus avellana
Haze_08067 Corylus avellana
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla
HPP92_021116 Vanilla planifolia
Hund11143 Selenicereus undatus
Lalb_Chr05g0215451 Lupinus albus
Lj2g0015502 Lotus japonicus
Lj8A334G75 Lonicera japonica
Lsat_1_v5_gn_5_58981 Lactuca sativa
Manes.17G003600 Manihot esculenta
Mapoly0153s0025 Marchantia polymorpha
MBI04_g27277_MAGBIO Magnolia biondii
MD00G1001800 Malus domestica
MD06G1015300 Malus domestica
Medtr5g026860 Medicago truncatula
MELO3C013795.2 Cucumis melo
Migut.E01349 Erythranthe guttata
MSTRG.13905 Avicennia marina
MSTRG.1771 Avicennia marina
Nitab4.5_0000030g0090 Nicotiana tabacum
Nitab4.5_0002930g0010 Nicotiana tabacum
Nn1g02066 Nelumbo nucifera
Oeu042210.1 Olea europaea
Oeu046805.1 Olea europaea
Os04g0600400 Oryza sativa ssp. japonica
Peaxi162Scf02295g00024 Petunia axillaris
PGR042G2449 Punica granatum
PGSC0003DMG400030871 Solanum tuberosum
Phvul.002G128700 Phaseolus vulgaris
Potri.001G130900 Populus trichocarpa
Potri.003G103000 Populus trichocarpa
Pp3c6_11480 Physcomitrium patens
Prupe.5G020400 Prunus persica
Psat2g142160 Pisum sativum
PSO675G7054 Papaver somniferum
PSO717G0022 Papaver somniferum
PSO717G0069 Papaver somniferum
QL12p001050 Quercus lobata
RcHm_v2.0_Chr7g0213391 Rosa chinensis
Rhsim07G0138900 Rhododendron simsii
Sabra01G0101200 Salix brachista
Sabra03G0070200 Salix brachista
SalBow8G2874 Salvia bowleyana
Sc01g0007030 Simmondsia chinensis
Sed0000446 Sechium edule
SEGI_32375 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31365 Striga asiatica
SMO169G0249 Selaginella moellendorffii
Solyc08g075770.3 Solanum lycopersicum
Sopen08g024420 Solanum pennellii
Sp7g17840 Schrenkiella parvula
TAR381G0569 Trochodendron aralioides
THA.LOC104806194 Tarenaya hassleriana
THA.LOC104811073 Tarenaya hassleriana
Thecc.03G317600 Theobroma cacao
Thhalv10025843m.g Eutrema salsugineum
TPR.G17260 Trifolium pratense
TWI12G1028 Tripterygium wilfordii
unitig_899.g14736 Utricularia gibba
vmacro14234 Vaccinium macrocarpon
VMungo1215G0316 Vigna mungo
Zm00001eb071860 Zea mays

User provided reference genes

Program Settings