Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p28510 Brassica napus
A05p08590 Brassica napus
Aa31LG5G22650 Aethionema arabicum
Aa31LG5G22660 Aethionema arabicum
Aa31LG5G22670 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis
Actinidia05285 Actinidia chinensis
Actinidia11237 Actinidia chinensis
Actinidia13264 Actinidia chinensis
Actinidia19734 Actinidia chinensis
Ah.15g091970 Amaranthus hybridus
AL4G33710 Arabidopsis lyrata
Aqoxy2G00899 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea
AT2G37330 Arabidopsis thaliana
ATR0594G178 Amborella trichopoda
Atru.chr8.2507 Acer truncatum
AUR62041007 Chenopodium quinoa
BcaB02g09288 Brassica carinata
BcaB06g28984 Brassica carinata
BcaC02g07517 Brassica carinata
BcaC02g11852 Brassica carinata
BolC4t22661H Brassica oleracea
BolC4t28086H Brassica oleracea
BraA04t18329Z Brassica rapa
BraA05t19827Z Brassica rapa
C04p10680 Brassica napus
C04p65830 Brassica napus
CAN.G687.19 Capsicum annuum
CANSAT80G1914 Cannabis sativa
CARHR132260 Cardamine hirsuta
Carub.0004s1924 Capsella rubella
Ca_08807_v3 Cicer arietinum L.
CBR_g3295 Chara braunii
Cc06_g03270 Coffea canephora
CDE07G0433 Ceratophyllum demersum
Cfa017467 Carpinus fangiana
Ciclev10012473m.g Citrus clementina
CiPaw.09G185300 Carya illinoinensis
ClCG10G020740 Citrullus lanatus
COL.COLO4_10311 Corchorus olitorius
Cpa.g.sc114.24 Carica papaya
Cre16.g673000 Chlamydomonas reinhardtii
CsaV3_3G035240 Cucumis sativus L.
CSS0020892 Camellia sinensis var. sinensis
DCAR_020866 Daucus carota
Dinv35677 Davidia involucrata
Duzib093G0581 Durio zibethinus
Duzib106G1538 Durio zibethinus
Duzib128G1635 Durio zibethinus
ECA233G2168 Erigeron canadensis
EL10Ac7g17275 Beta vulgaris
Eucgr.A01210 Eucalyptus grandis
Eucgr.K03183 Eucalyptus grandis
FAN02G2849 Fragaria x ananassa
FAN05G1034 Fragaria x ananassa
FAN09G4388 Fragaria x ananassa
FAN14G3394 Fragaria x ananassa
FvH4_6g14820 Fragaria vesca
Glyma.03G175800 Glycine max
Glyma.10G047100 Glycine max
Gohir.A04G077900 Gossypium hirsutum
Gohir.D04G117100 Gossypium hirsutum
Gorai.009G422000 Gossypium raimondii
GSVIVG01025576001 Vitis vinifera
HanXRQChr13g0399331 Helianthus annuus
Haze_20691 Corylus avellana
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla
HPP92_021201 Vanilla planifolia
Hund12071 Selenicereus undatus
Lalb_Chr20g0113031 Lupinus albus
Lalb_Chr25g0289351 Lupinus albus
Lj1g0020453 Lotus japonicus
Lj2A103T72 Lonicera japonica
Lj3A975G71 Lonicera japonica
Lsat_1_v5_gn_6_33160 Lactuca sativa
Manes.08G000700 Manihot esculenta
Mapoly0099s0026 Marchantia polymorpha
MBI14_g34528_MAGBIO Magnolia biondii
MD04G1110300 Malus domestica
MD08G1090300 Malus domestica
MD12G1131100 Malus domestica
Medtr7g100160 Medicago truncatula
MELO3C009294.2 Cucumis melo
Migut.L01643 Erythranthe guttata
MSTRG.26742 Avicennia marina
Nitab4.5_0000725g0200 Nicotiana tabacum
Nitab4.5_0002073g0040 Nicotiana tabacum
Nn1g07598 Nelumbo nucifera
Nn2g12822 Nelumbo nucifera
Nn5g28122 Nelumbo nucifera
Oeu004323.1 Olea europaea
Oeu026074.1 Olea europaea
Os05g0119000 Oryza sativa ssp. japonica
Peaxi162Scf00009g00079 Petunia axillaris
PGR004G1166 Punica granatum
PGSC0003DMG400017610 Solanum tuberosum
Phvul.001G172900 Phaseolus vulgaris
Potri.006G215700 Populus trichocarpa
Potri.016G082100 Populus trichocarpa
Pp3c20_6820 Physcomitrium patens
Prupe.6G245600 Prunus persica
Psat0s1952g0120 Pisum sativum
PSO339G1263 Papaver somniferum
PSO384G3658 Papaver somniferum
QL07p045958 Quercus lobata
RcHm_v2.0_Chr3g0468051 Rosa chinensis
Rhsim05G0184400 Rhododendron simsii
Sabra16G0089800 Salix brachista
Sc01g0003780 Simmondsia chinensis
Sed0012545 Sechium edule
SEGI_29713 Sequoiadendron giganteum
SEGI_41460 Sequoiadendron giganteum
SGA_v2.0_scaffold94G28648 Striga asiatica
SMO271G0174 Selaginella moellendorffii
SMO364G0860 Selaginella moellendorffii
Solyc10g085950.2 Solanum lycopersicum
Sopen10g035320 Solanum pennellii
Sp4g19650 Schrenkiella parvula
TAR623G1105 Trochodendron aralioides
THA.LOC104823437 Tarenaya hassleriana
Thecc.05G049500 Theobroma cacao
Thhalv10017068m.g Eutrema salsugineum
TPR.G21452 Trifolium pratense
TWI74G1319 Tripterygium wilfordii
unitig_578.g16043 Utricularia gibba
vmacro20093 Vaccinium macrocarpon

User provided reference genes

Program Settings