Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p23170 Brassica napus
A05p15090 Brassica napus
A09p66670 Brassica napus
Aa31LG5G6330 Aethionema arabicum
Ah.08g217120 Amaranthus hybridus
Ah.15g095100 Amaranthus hybridus
AL1G16950 Arabidopsis lyrata
AL4G25260 Arabidopsis lyrata
Aqoxy2G00718 Aquilegia oxysepala
AT1G06923 Arabidopsis thaliana
AT2G30395 Arabidopsis thaliana
ATR0681G143 Amborella trichopoda
Atru.chr1.2524 Acer truncatum
BcaB02g10322 Brassica carinata
BcaB06g28364 Brassica carinata
BcaC02g08022 Brassica carinata
BcaC02g11133 Brassica carinata
BcaC07g42036 Brassica carinata
BcaC07g42037 Brassica carinata
BcaC07g42550 Brassica carinata
BolC4t23551H Brassica oleracea
BolC4t27440H Brassica oleracea
BolC8t52618H Brassica oleracea
BraA04t17844Z Brassica rapa
BraA05t20430Z Brassica rapa
BraA09t42007Z Brassica rapa
C04p20120 Brassica napus
C04p59320 Brassica napus
C08p50900 Brassica napus
CAN.G1872.4 Capsicum annuum
CANSAT54G0691 Cannabis sativa
CARHR006600 Cardamine hirsuta
CARHR123750 Cardamine hirsuta
CARHR123780 Cardamine hirsuta
Carub.0001s0622 Capsella rubella
Carub.0004s1155 Capsella rubella
Ca_05700_v3 Cicer arietinum L.
Ca_30026_v3 Cicer arietinum L.
Cc01_g15210 Coffea canephora
Cfa011817 Carpinus fangiana
Ciclev10003853m.g Citrus clementina
CiPaw.13G065100 Carya illinoinensis
CiPaw.14G051700 Carya illinoinensis
ClCG02G019100 Citrullus lanatus
COL.COLO4_11196 Corchorus olitorius
Cpa.g.sc2.317 Carica papaya
CsaV3_6G019090 Cucumis sativus L.
CSS0038993 Camellia sinensis var. sinensis
DCAR_023195 Daucus carota
Dinv04837 Davidia involucrata
Dinv12270 Davidia involucrata
Dinv28722 Davidia involucrata
Duzib168G0649 Durio zibethinus
ECA236G1285 Erigeron canadensis
EL10Ac7g16454 Beta vulgaris
Eucgr.J01842 Eucalyptus grandis
FAN11G2330 Fragaria x ananassa
FAN16G3236 Fragaria x ananassa
FAN21G1009 Fragaria x ananassa
FAN25G1085 Fragaria x ananassa
FvH4_3g40300 Fragaria vesca
Glyma.02G235500 Glycine max
Glyma.14G203500 Glycine max
Gohir.A05G129400 Gossypium hirsutum
Gohir.D05G134050 Gossypium hirsutum
Gorai.009G137600 Gossypium raimondii
GSVIVG01024580001 Vitis vinifera
HanXRQChr01g0028631 Helianthus annuus
HanXRQChr17g0565391 Helianthus annuus
Haze_24453 Corylus avellana
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla
Lalb_Chr17g0345591 Lupinus albus
LjContig00141g0008224 Lotus japonicus
Lsat_1_v5_gn_0_40840 Lactuca sativa
Manes.18G139500 Manihot esculenta
MBI03_g02190_MAGBIO Magnolia biondii
MD03G1053700 Malus domestica
MD11G1055300 Malus domestica
Medtr5g075190 Medicago truncatula
MELO3C026874.2 Cucumis melo
Migut.D00827 Erythranthe guttata
Migut.N00743 Erythranthe guttata
MSTRG.17909 Avicennia marina
Nitab4.5_0000002g0080 Nicotiana tabacum
Nitab4.5_0002091g0020 Nicotiana tabacum
Nitab4.5_0002759g0020 Nicotiana tabacum
Nitab4.5_0007927g0010 Nicotiana tabacum
Nn5g26879 Nelumbo nucifera
Oeu011373.1 Olea europaea
Oeu064677.1 Olea europaea
Os05g0328300 Oryza sativa ssp. japonica
Os07g0679100 Oryza sativa ssp. japonica
Peaxi162Scf00390g00049 Petunia axillaris
Peaxi162Scf01692g00003 Petunia axillaris
PGR119G2032 Punica granatum
PGSC0003DMG400046061 Solanum tuberosum
Phvul.006G076900 Phaseolus vulgaris
Phvul.008G248400 Phaseolus vulgaris
Potri.013G155300 Populus trichocarpa
Potri.019G128400 Populus trichocarpa
Prupe.6G042800 Prunus persica
Psat2g052120 Pisum sativum
PSO017G7297 Papaver somniferum
PSO170G5428 Papaver somniferum
QL01p025125 Quercus lobata
RcHm_v2.0_Chr5g0072641 Rosa chinensis
Rhsim13G0060900 Rhododendron simsii
Sabra13G0125100 Salix brachista
Sabra19G0126000 Salix brachista
SalBow6G3501 Salvia bowleyana
Sc21g0004870 Simmondsia chinensis
Sed0019639 Sechium edule
SEGI_34718 Sequoiadendron giganteum
SGA_v2.0_scaffold77G25368 Striga asiatica
Solyc01g090870.1 Solanum lycopersicum
Solyc06g082450.1 Solanum lycopersicum
Sopen01g036610 Solanum pennellii
Sopen06g033830 Solanum pennellii
Sp1g05630 Schrenkiella parvula
Sp4g12950 Schrenkiella parvula
TAR623G0423 Trochodendron aralioides
THA.LOC104800785 Tarenaya hassleriana
Thecc.09G362300 Theobroma cacao
Thhalv10009633m.g Eutrema salsugineum
Thhalv10017852m.g Eutrema salsugineum
Thhalv10017867m.g Eutrema salsugineum
TPR.G25771 Trifolium pratense
TWI79G1455 Tripterygium wilfordii
vmacro02888 Vaccinium macrocarpon
VMungo0647G0754 Vigna mungo
Zm00001eb330630 Zea mays
Zm00001eb350230 Zea mays

User provided reference genes

Program Settings