Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p17720 Brassica napus
Aa31LG5G9380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis
Actinidia30258 Actinidia chinensis
Actinidia39617 Actinidia chinensis
Ah.14g084710 Amaranthus hybridus
AL7G18300 Arabidopsis lyrata
Aqoxy7G04154 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea
AT4G33250 Arabidopsis thaliana
ATR0317G112 Amborella trichopoda
ATR0705G105 Amborella trichopoda
Atru.chr7.1767 Acer truncatum
AUR62025338 Chenopodium quinoa
AUR62028321 Chenopodium quinoa
BcaB03g12809 Brassica carinata
BcaC01g01000 Brassica carinata
BcaC09g52137 Brassica carinata
BcaNung02163 Brassica carinata
BolC3t20971H Brassica oleracea
BolC7t46402H Brassica oleracea
BraA03t15230Z Brassica rapa
BraA08t33722Z Brassica rapa
C03p86770 Brassica napus
C07p59570 Brassica napus
CAN.G54.13 Capsicum annuum
CANSAT56G0116 Cannabis sativa
CANSAT56G0193 Cannabis sativa
CARHR241300 Cardamine hirsuta
Carub.0007s0721 Capsella rubella
CBR_g16046 Chara braunii
Cc06_g12700 Coffea canephora
CDE06G1359 Ceratophyllum demersum
CDE07G2051 Ceratophyllum demersum
Cfa002937 Carpinus fangiana
Ciclev10009369m.g Citrus clementina
CiPaw.03G200400 Carya illinoinensis
CiPaw.04G140200 Carya illinoinensis
ClCG03G014750 Citrullus lanatus
COL.COLO4_21208 Corchorus olitorius
Cpa.g.sc82.63 Carica papaya
Cre12.g515650 Chlamydomonas reinhardtii
CsaV3_1G041410 Cucumis sativus L.
CSS0032580 Camellia sinensis var. sinensis
DCAR_028530 Daucus carota
Dinv25506 Davidia involucrata
Duzib150G0422 Durio zibethinus
Duzib168G0975 Durio zibethinus
ECA234G1587 Erigeron canadensis
EL10Ac8g18966 Beta vulgaris
Eucgr.C03197 Eucalyptus grandis
Eucgr.L02230 Eucalyptus grandis
FAN19G2090 Fragaria x ananassa
FAN23G1113 Fragaria x ananassa
FAN26G0600 Fragaria x ananassa
FAN26G2189 Fragaria x ananassa
FAN28G0037 Fragaria x ananassa
FAN28G0822 Fragaria x ananassa
FvH4_1g09390 Fragaria vesca
Glyma.13G114300 Glycine max
Glyma.17G045500 Glycine max
Gohir.A05G036100 Gossypium hirsutum
Gohir.D05G037600 Gossypium hirsutum
Gorai.009G038100 Gossypium raimondii
GSVIVG01015014001 Vitis vinifera
HanXRQChr10g0319821 Helianthus annuus
Haze_26069 Corylus avellana
HPP92_004361 Vanilla planifolia
Hund26110 Selenicereus undatus
Lalb_Chr07g0181411 Lupinus albus
Lalb_Chr13g0299191 Lupinus albus
Lj4g0000458 Lotus japonicus
Lj7C692T6 Lonicera japonica
Lsat_1_v5_gn_5_138841 Lactuca sativa
Manes.03G044600 Manihot esculenta
Manes.16G090500 Manihot esculenta
Mapoly0073s0056 Marchantia polymorpha
MBI13_g01673_MAGBIO Magnolia biondii
MBI19_g36230_MAGBIO Magnolia biondii
MD02G1101200 Malus domestica
MD02G1102200 Malus domestica
MD15G1223700 Malus domestica
Medtr4g124640 Medicago truncatula
MELO3C015553.2 Cucumis melo
Migut.J00881 Erythranthe guttata
Migut.L01596 Erythranthe guttata
MSTRG.26500 Avicennia marina
Nitab4.5_0000170g0090 Nicotiana tabacum
Nitab4.5_0003139g0080 Nicotiana tabacum
Nn6g35632 Nelumbo nucifera
Oeu000276.3 Olea europaea
Oeu041808.1 Olea europaea
Os03g0182700 Oryza sativa ssp. japonica
Peaxi162Scf00474g00521 Petunia axillaris
PGR044G1586 Punica granatum
PGSC0003DMG400013572 Solanum tuberosum
Phvul.003G127300 Phaseolus vulgaris
Potri.006G136500 Populus trichocarpa
Potri.018G063600 Populus trichocarpa
Pp3c18_14720 Physcomitrium patens
Pp3c21_14860 Physcomitrium patens
PRCOL_00003879 Prasinoderma coloniale
Prupe.7G192100 Prunus persica
PSO135G0575 Papaver somniferum
PSO724G0923 Papaver somniferum
QL11p002956 Quercus lobata
RcHm_v2.0_Chr2g0095941 Rosa chinensis
Rhsim05G0002100 Rhododendron simsii
Sabra06G0106700 Salix brachista
SalBow6G6500 Salvia bowleyana
Sc08g0009170 Simmondsia chinensis
Sed0006808 Sechium edule
Sed0027227 Sechium edule
SEGI_21232 Sequoiadendron giganteum
SGA_v2.0_scaffold55G19875 Striga asiatica
SMO239G0051 Selaginella moellendorffii
Solyc07g042570.3 Solanum lycopersicum
Sopen07g022260 Solanum pennellii
Sp7g31000 Schrenkiella parvula
TAR383G1060 Trochodendron aralioides
THA.LOC104803783 Tarenaya hassleriana
Thecc.09G070300 Theobroma cacao
Thhalv10026154m.g Eutrema salsugineum
TPR.G12577 Trifolium pratense
TWI34G0930 Tripterygium wilfordii
unitig_899.g15181 Utricularia gibba
vmacro17078 Vaccinium macrocarpon
VMungo1215G3086 Vigna mungo
Zm00001eb006150 Zea mays
Zm00001eb401690 Zea mays
Zm00001eb401710 Zea mays

User provided reference genes

Program Settings