Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p16120 Brassica napus
Aa31LG3G7950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2738 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3357 Anthoceros agrestis
Actinidia25023 Actinidia chinensis
Ah.07g207990 Amaranthus hybridus
Ah.07g208040 Amaranthus hybridus
Ah.07g208140 Amaranthus hybridus
AL8G25840 Arabidopsis lyrata
Aqoxy5G03938 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1LKT55 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UP65TY Arachis hypogaea
AT5G51540 Arabidopsis thaliana
ATR0115G032 Amborella trichopoda
Atru.chr1.666 Acer truncatum
Atru.chr1.671 Acer truncatum
AUR62016181 Chenopodium quinoa
AUR62035100 Chenopodium quinoa
BcaB01g04169 Brassica carinata
BcaC01g06127 Brassica carinata
BolC3t14288H Brassica oleracea
BraA03t10903Z Brassica rapa
C03p18990 Brassica napus
CAN.G152.16 Capsicum annuum
CARHR264310 Cardamine hirsuta
Carub.0008s1157 Capsella rubella
Ca_14119_v3 Cicer arietinum L.
CBR_g38873 Chara braunii
Cc02_g04060 Coffea canephora
CDE02G2841 Ceratophyllum demersum
Cfa008218 Carpinus fangiana
Ciclev10004402m.g Citrus clementina
CiPaw.03G109500 Carya illinoinensis
CiPaw.04G061500 Carya illinoinensis
ClCG05G007440 Citrullus lanatus
COL.COLO4_14151 Corchorus olitorius
Cpa.g.sc3.294 Carica papaya
Cpa.g.sc3.295 Carica papaya
Cre02.g073300 Chlamydomonas reinhardtii
Cre02.g073400 Chlamydomonas reinhardtii
CsaV3_3G016260 Cucumis sativus L.
CSS0033156 Camellia sinensis var. sinensis
DCAR_018091 Daucus carota
DCAR_018093 Daucus carota
Dinv22965 Davidia involucrata
Duzib205G0588 Durio zibethinus
ECA233G5295 Erigeron canadensis
EL10Ac3g05815 Beta vulgaris
Eucgr.K00152 Eucalyptus grandis
FAN03G1032 Fragaria x ananassa
FAN06G0529 Fragaria x ananassa
FAN06G2156 Fragaria x ananassa
FAN10G0255 Fragaria x ananassa
FvH4_7g27930 Fragaria vesca
Glyma.02G058051 Glycine max
Glyma.02G058100 Glycine max
Glyma.04G117400 Glycine max
Gohir.A11G007600 Gossypium hirsutum
Gohir.D11G010266 Gossypium hirsutum
Gorai.007G008100 Gossypium raimondii
GSVIVG01018568001 Vitis vinifera
GSVIVG01018572001 Vitis vinifera
HanXRQChr08g0223861 Helianthus annuus
Haze_13840 Corylus avellana
HPP92_003264 Vanilla planifolia
HPP92_003266 Vanilla planifolia
Hund11806 Selenicereus undatus
Lalb_Chr18g0048781 Lupinus albus
Lj3g0024133 Lotus japonicus
Lj3g0024543 Lotus japonicus
Lj8C39T8 Lonicera japonica
Lsat_1_v5_gn_4_108021 Lactuca sativa
Lsat_1_v5_gn_4_160500 Lactuca sativa
Lsat_1_v5_gn_8_9260 Lactuca sativa
Manes.14G034200 Manihot esculenta
Mapoly0001s0567 Marchantia polymorpha
MBI04_g35669_MAGBIO Magnolia biondii
MBI12_g31043_MAGBIO Magnolia biondii
MCO13G480 Micromonas commoda
MD07G1256400 Malus domestica
MD17G1037100 Malus domestica
Medtr3g009160 Medicago truncatula
MELO3C006824.2 Cucumis melo
Migut.F00455 Erythranthe guttata
Nitab4.5_0000072g0570 Nicotiana tabacum
Nitab4.5_0001548g0060 Nicotiana tabacum
Nn4g26350 Nelumbo nucifera
Oeu021716.2 Olea europaea
Os06g0686500 Oryza sativa ssp. japonica
PGR142G1204 Punica granatum
PGSC0003DMG401023000 Solanum tuberosum
PGSC0003DMG402023000 Solanum tuberosum
Phvul.005G006700 Phaseolus vulgaris
Potri.015G129300 Populus trichocarpa
Pp3c16_10250 Physcomitrium patens
PRCOL_00002209 Prasinoderma coloniale
Prupe.2G280500 Prunus persica
Psat5g230800 Pisum sativum
PSO063G6398 Papaver somniferum
QL09p019069 Quercus lobata
RcHm_v2.0_Chr1g0374891 Rosa chinensis
Rhsim03G0169500 Rhododendron simsii
SalBow4G1013 Salvia bowleyana
SalBow4G1780 Salvia bowleyana
SalBow4G3350 Salvia bowleyana
Sc19g0001930 Simmondsia chinensis
Sed0017785 Sechium edule
SEGI_04204 Sequoiadendron giganteum
SEGI_10637 Sequoiadendron giganteum
SEGI_24593 Sequoiadendron giganteum
SEGI_26598 Sequoiadendron giganteum
SEGI_34079 Sequoiadendron giganteum
SGA_v2.0_scaffold543G52820 Striga asiatica
SMO172G0186 Selaginella moellendorffii
Solyc03g083580.3 Solanum lycopersicum
Sopen03g023390 Solanum pennellii
Sp6g13730 Schrenkiella parvula
TAR375G0868 Trochodendron aralioides
THA.LOC104811515 Tarenaya hassleriana
Thecc.03G158700 Theobroma cacao
Thhalv10012823m.g Eutrema salsugineum
TPR.G20847 Trifolium pratense
TPR.G27559 Trifolium pratense
TWI23G0886 Tripterygium wilfordii
TWI31G0352 Tripterygium wilfordii
TWI39G0324 Tripterygium wilfordii
unitig_46.g18766 Utricularia gibba
vmacro06779 Vaccinium macrocarpon
VMungo1080G0003 Vigna mungo
VMungo1080G1058 Vigna mungo
VMungo1080G1213 Vigna mungo
Zm00001eb225650 Zea mays

User provided reference genes

Program Settings