Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p09890 Brassica napus
A10p19740 Brassica napus
Aa31LG10G8610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3656 Anthoceros agrestis
Actinidia22739 Actinidia chinensis
Actinidia27305 Actinidia chinensis
AL6G31720 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.55451G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K0QS2G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XCNA8V Arachis hypogaea
AT5G20165 Arabidopsis thaliana
ATR0955G005 Amborella trichopoda
BolC3t13619H Brassica oleracea
BolC9t58470H Brassica oleracea
BraA03t10302Z Brassica rapa
BraA10t44050Z Brassica rapa
C03p11470 Brassica napus
C09p56030 Brassica napus
CAN.G1089.18 Capsicum annuum
CAN.G843.5 Capsicum annuum
CANSAT21G2474 Cannabis sativa
CARHR192660 Cardamine hirsuta
Carub.0006s1856 Capsella rubella
Cc00_g13530 Coffea canephora
CDE10G0420 Ceratophyllum demersum
CDE10G0705 Ceratophyllum demersum
Ciclev10033263m.g Citrus clementina
CiPaw.05G112200 Carya illinoinensis
CiPaw.06G100600 Carya illinoinensis
ClCG08G010140 Citrullus lanatus
Cre07.g325735 Chlamydomonas reinhardtii
CSS0024427 Camellia sinensis var. sinensis
Dinv14819 Davidia involucrata
Dinv16088 Davidia involucrata
Duzib248G1204 Durio zibethinus
Duzib251G0400 Durio zibethinus
ECA246G0405 Erigeron canadensis
EL10Ac6g13474 Beta vulgaris
Eucgr.B03471 Eucalyptus grandis
FAN04G2943 Fragaria x ananassa
FAN07G2898 Fragaria x ananassa
FAN08G3074 Fragaria x ananassa
FAN12G4044 Fragaria x ananassa
FAN16G3630 Fragaria x ananassa
FAN17G0158 Fragaria x ananassa
FAN18G3129 Fragaria x ananassa
FvH4_3g12470 Fragaria vesca
FvH4_4g23990 Fragaria vesca
FvH4_5g11580 Fragaria vesca
Glyma.11G249100 Glycine max
Glyma.18G008200 Glycine max
Gohir.A03G127300 Gossypium hirsutum
Gohir.D02G150700 Gossypium hirsutum
Gorai.002G192200 Gossypium raimondii
Gorai.005G169000 Gossypium raimondii
HanXRQChr07g0190741 Helianthus annuus
HanXRQChr17g0534681 Helianthus annuus
HPP92_000512 Vanilla planifolia
Lalb_Chr05g0223941 Lupinus albus
Lalb_Chr09g0332191 Lupinus albus
Lj4g0023384 Lotus japonicus
Lsat_1_v5_gn_3_12801 Lactuca sativa
Lsat_1_v5_gn_6_8840 Lactuca sativa
Manes.12G013300 Manihot esculenta
Manes.13G017850 Manihot esculenta
Mapoly0008s0042 Marchantia polymorpha
MBI07_g24770_MAGBIO Magnolia biondii
MCO08G327 Micromonas commoda
MD06G1111800 Malus domestica
MD14G1133000 Malus domestica
Medtr3g085600 Medicago truncatula
MELO3C030289.2 Cucumis melo
Migut.B01726 Erythranthe guttata
Migut.N01429 Erythranthe guttata
MSTRG.28215 Avicennia marina
Nitab4.5_0000976g0200 Nicotiana tabacum
Nitab4.5_0001841g0040 Nicotiana tabacum
Nitab4.5_0005774g0040 Nicotiana tabacum
Nitab4.5_0008858g0060 Nicotiana tabacum
Nn1g00299 Nelumbo nucifera
Nn3g18946 Nelumbo nucifera
Os02g0299600 Oryza sativa ssp. japonica
Os05g0251500 Oryza sativa ssp. japonica
Peaxi162Scf00207g00238 Petunia axillaris
Peaxi162Scf00314g00635 Petunia axillaris
PGR004G0564 Punica granatum
PGR102G2803 Punica granatum
PGSC0003DMG400025576 Solanum tuberosum
Phvul.001G260400 Phaseolus vulgaris
Potri.008G176801 Populus trichocarpa
Potri.010G058300 Populus trichocarpa
Pp3s128_20 Physcomitrium patens
PRCOL_00003875 Prasinoderma coloniale
Prupe.5G124600 Prunus persica
Psat5g094720 Pisum sativum
Psat7g023880 Pisum sativum
PSO063G0123 Papaver somniferum
PSO170G6765 Papaver somniferum
RcHm_v2.0_Chr4g0430651 Rosa chinensis
RcHm_v2.0_Chr5g0020411 Rosa chinensis
RcHm_v2.0_Chr7g0186171 Rosa chinensis
Rhsim07G0080600 Rhododendron simsii
Rhsim12G0028200 Rhododendron simsii
Sabra08G0134600 Salix brachista
Sabra10G0047000 Salix brachista
SalBow3G2240 Salvia bowleyana
SalBow5G0243 Salvia bowleyana
SalBow5G1014 Salvia bowleyana
Sed0005468 Sechium edule
Sed0027475 Sechium edule
SEGI_28367 Sequoiadendron giganteum
SHI17703 Sapria himalayana
Solyc03g118140.3 Solanum lycopersicum
Solyc06g068780.3 Solanum lycopersicum
Sopen03g037060 Solanum pennellii
Sopen06g026060 Solanum pennellii
Sp6g24240 Schrenkiella parvula
TAR374G1140 Trochodendron aralioides
THA.LOC104799646 Tarenaya hassleriana
THA.LOC109116592 Tarenaya hassleriana
Thecc.02G276900 Theobroma cacao
Thhalv10015210m.g Eutrema salsugineum
TPR.G21803 Trifolium pratense
TPR.G37229 Trifolium pratense
TWI14G1045 Tripterygium wilfordii
TWI36G1309 Tripterygium wilfordii
TWI36G1530 Tripterygium wilfordii
unitig_0.g1509 Utricularia gibba
unitig_747.g21988 Utricularia gibba
vmacro01071 Vaccinium macrocarpon
vmacro14062 Vaccinium macrocarpon
Zm00001eb237180 Zea mays

User provided reference genes

Program Settings