Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p48990 Brassica napus
Aa31LG10G10960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis
Actinidia00667 Actinidia chinensis
Actinidia00964 Actinidia chinensis
Actinidia04126 Actinidia chinensis
Ah.00g001390 Amaranthus hybridus
Ah.16g103770 Amaranthus hybridus
AL5G37310 Arabidopsis lyrata
Aqoxy1G01260 Aquilegia oxysepala
Aqoxy2G01148 Aquilegia oxysepala
Aqoxy4G00767 Aquilegia oxysepala
Aqoxy4G01451 Aquilegia oxysepala
Aqoxy4G01461 Aquilegia oxysepala
Aqoxy4G02431 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea
AT3G56040 Arabidopsis thaliana
ATR0174G021 Amborella trichopoda
Atru.chr12.85 Acer truncatum
AUR62012278 Chenopodium quinoa
AUR62022920 Chenopodium quinoa
BcaB01g00040 Brassica carinata
BolC8t50756H Brassica oleracea
BraA09t40354Z Brassica rapa
C08p31350 Brassica napus
CAN.G19.18 Capsicum annuum
CANSAT56G2579 Cannabis sativa
CARHR166110 Cardamine hirsuta
Carub.0005s2277 Capsella rubella
Ca_15144_v3 Cicer arietinum L.
CBR_g61489 Chara braunii
Cc02_g06180 Coffea canephora
CDE04G2646 Ceratophyllum demersum
CDE04G2743 Ceratophyllum demersum
Cfa001293 Carpinus fangiana
Ciclev10030686m.g Citrus clementina
CiPaw.02G194600 Carya illinoinensis
ClCG11G006010 Citrullus lanatus
COL.COLO4_25772 Corchorus olitorius
Cpa.g.sc19.149 Carica papaya
Cre12.g554250 Chlamydomonas reinhardtii
CsaV3_6G001950 Cucumis sativus L.
CsaV3_6G001960 Cucumis sativus L.
CSS0046957 Camellia sinensis var. sinensis
DCAR_024814 Daucus carota
Dinv21757 Davidia involucrata
Duzib106G1087 Durio zibethinus
Duzib114G0783 Durio zibethinus
ECA238G3710 Erigeron canadensis
EL10Ac2g04871 Beta vulgaris
Eucgr.J00183 Eucalyptus grandis
FAN01G2918 Fragaria x ananassa
FAN03G2902 Fragaria x ananassa
FAN06G2004 Fragaria x ananassa
FAN10G1632 Fragaria x ananassa
FvH4_7g24830 Fragaria vesca
Glyma.11G231700 Glycine max
Glyma.18G025500 Glycine max
Gohir.A10G239000 Gossypium hirsutum
Gohir.D10G250900 Gossypium hirsutum
Gorai.011G291300 Gossypium raimondii
GSVIVG01032777001 Vitis vinifera
HanXRQChr07g0203141 Helianthus annuus
Haze_17256 Corylus avellana
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla
HPP92_007567 Vanilla planifolia
HPP92_007577 Vanilla planifolia
HPP92_007578 Vanilla planifolia
HPP92_007579 Vanilla planifolia
Hund15853 Selenicereus undatus
Hund15900 Selenicereus undatus
Lalb_Chr23g0277021 Lupinus albus
Lj1C959G18 Lonicera japonica
Lj6g0019628 Lotus japonicus
Lsat_1_v5_gn_2_123720 Lactuca sativa
Manes.10G010100 Manihot esculenta
Mapoly0007s0127 Marchantia polymorpha
MBI15_g40751_MAGBIO Magnolia biondii
MCO05G015 Micromonas commoda
MD01G1156200 Malus domestica
MD01G1156300 Malus domestica
MD07G1224900 Malus domestica
Medtr3g071440 Medicago truncatula
MELO3C008313.2 Cucumis melo
Migut.F01477 Erythranthe guttata
Nitab4.5_0000058g0250 Nicotiana tabacum
Nitab4.5_0000969g0030 Nicotiana tabacum
Nn2g10945 Nelumbo nucifera
Oeu011112.1 Olea europaea
Os05g0468600 Oryza sativa ssp. japonica
Peaxi162Scf00284g00620 Petunia axillaris
PGR044G1548 Punica granatum
Phvul.001G244900 Phaseolus vulgaris
Potri.010G185800 Populus trichocarpa
Pp3c22_15610 Physcomitrium patens
PRCOL_00004696 Prasinoderma coloniale
Prupe.2G253500 Prunus persica
Psat5g130440 Pisum sativum
PSO017G4998 Papaver somniferum
PSO170G3027 Papaver somniferum
QL08p063536 Quercus lobata
RcHm_v2.0_Chr1g0370701 Rosa chinensis
Rhsim09G0179300 Rhododendron simsii
Rhsim12G0072900 Rhododendron simsii
Rhsim12G0073000 Rhododendron simsii
RhsimUnG0153700 Rhododendron simsii
Sabra10G0143100 Salix brachista
Sc10g0002520 Simmondsia chinensis
Sed0020446 Sechium edule
SEGI_09306 Sequoiadendron giganteum
SEGI_34891 Sequoiadendron giganteum
SEGI_37602 Sequoiadendron giganteum
SGA_v2.0_scaffold22G09950 Striga asiatica
SGA_v2.0_scaffold395G50730 Striga asiatica
SGA_v2.0_scaffold85G26646 Striga asiatica
SMO141G0067 Selaginella moellendorffii
Solyc06g051080.4 Solanum lycopersicum
Sopen06g016900 Solanum pennellii
Sp5g06500 Schrenkiella parvula
TAR633G1521 Trochodendron aralioides
THA.LOC104811372 Tarenaya hassleriana
THA.LOC104824329 Tarenaya hassleriana
Thecc.10G012700 Theobroma cacao
Thhalv10005783m.g Eutrema salsugineum
TPR.G10616 Trifolium pratense
TWI09G1402 Tripterygium wilfordii
unitig_60.g25670 Utricularia gibba
vmacro10023 Vaccinium macrocarpon
VMungo1383G1379 Vigna mungo
Zm00001eb351780 Zea mays

User provided reference genes

Program Settings