Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p15850 Brassica napus
Aa31LG3G8470 Aethionema arabicum
Actinidia32894 Actinidia chinensis
Actinidia34080 Actinidia chinensis
Ah.13g068310 Amaranthus hybridus
AL8G26470 Arabidopsis lyrata
Aqoxy7G00442 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AYWY8E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UTGK89 Arachis hypogaea
AT5G52100 Arabidopsis thaliana
ATR0757G004 Amborella trichopoda
AUR62016030 Chenopodium quinoa
AUR62021235 Chenopodium quinoa
BcaB01g04183 Brassica carinata
BcaC01g06163 Brassica carinata
BolC3t14249H Brassica oleracea
BraA03t10875Z Brassica rapa
C03p18520 Brassica napus
CAN.G548.3 Capsicum annuum
CANSAT21G0538 Cannabis sativa
CANSAT21G1747 Cannabis sativa
CARHR265020 Cardamine hirsuta
Carub.0008s1218 Capsella rubella
Ca_10793_v3 Cicer arietinum L.
CBR_g30244 Chara braunii
Cc00_g24160 Coffea canephora
CDE09G1316 Ceratophyllum demersum
Cfa008280 Carpinus fangiana
Ciclev10005510m.g Citrus clementina
CiPaw.04G067400 Carya illinoinensis
ClCG05G007820 Citrullus lanatus
COL.COLO4_14264 Corchorus olitorius
Cpa.g.sc107.7 Carica papaya
Cpa.g.sc107.8 Carica papaya
CsaV3_3G016820 Cucumis sativus L.
CSS0027176 Camellia sinensis var. sinensis
CSS0048625 Camellia sinensis var. sinensis
DCAR_018171 Daucus carota
Dinv28478 Davidia involucrata
Duzib084G0661 Durio zibethinus
Duzib205G1997 Durio zibethinus
ECA233G0165 Erigeron canadensis
EL10Ac3g05696 Beta vulgaris
Eucgr.A02812 Eucalyptus grandis
FAN01G1428 Fragaria x ananassa
FAN03G0200 Fragaria x ananassa
FAN03G0500 Fragaria x ananassa
FAN06G0122 Fragaria x ananassa
FAN06G1408 Fragaria x ananassa
FvH4_7g29020 Fragaria vesca
Glyma.10G238800 Glycine max
Glyma.20G155600 Glycine max
Gohir.A09G039900 Gossypium hirsutum
Gohir.D09G040700 Gossypium hirsutum
Gorai.006G046600 Gossypium raimondii
GSVIVG01010618001 Vitis vinifera
HanXRQChr13g0405681 Helianthus annuus
Haze_13754 Corylus avellana
Hma1.2p1_0010F.1_g006890 Hydrangea macrophylla
Hma1.2p1_0270F.1_g108440 Hydrangea macrophylla
Hund04704 Selenicereus undatus
Lalb_Chr21g0304951 Lupinus albus
Lj1C993G3 Lonicera japonica
LjContig00238g0017909 Lotus japonicus
Lsat_1_v5_gn_8_7461 Lactuca sativa
Manes.06G143900 Manihot esculenta
Mapoly0001s0282 Marchantia polymorpha
MBI05_g08792_MAGBIO Magnolia biondii
MBI07_g12175_MAGBIO Magnolia biondii
MBI08_g23116_MAGBIO Magnolia biondii
MBI09_g40772_MAGBIO Magnolia biondii
MBI12_g29760_MAGBIO Magnolia biondii
MBI12_g45864_MAGBIO Magnolia biondii
MBI15_g15729_MAGBIO Magnolia biondii
MBI16_g19597_MAGBIO Magnolia biondii
MBI18_g06814_MAGBIO Magnolia biondii
MBI18_g28463_MAGBIO Magnolia biondii
MBI18_g34964_MAGBIO Magnolia biondii
MBI18_g40469_MAGBIO Magnolia biondii
MD01G1197000 Malus domestica
MD01G1197100 Malus domestica
MD07G1264500 Malus domestica
Medtr1g101400 Medicago truncatula
Medtr2g021790 Medicago truncatula
MELO3C006876.2 Cucumis melo
Migut.F00375 Erythranthe guttata
MSTRG.8763 Avicennia marina
Nitab4.5_0001083g0080 Nicotiana tabacum
Nitab4.5_0005024g0030 Nicotiana tabacum
Nn1g01364 Nelumbo nucifera
Oeu021758.1 Olea europaea
Os03g0117000 Oryza sativa ssp. japonica
Os03g0118600 Oryza sativa ssp. japonica
Peaxi162Scf00915g00243 Petunia axillaris
PGR042G3346 Punica granatum
PGSC0003DMG400014268 Solanum tuberosum
Phvul.007G066600 Phaseolus vulgaris
Potri.015G135400 Populus trichocarpa
Pp3c21_9920 Physcomitrium patens
Prupe.2G290400 Prunus persica
Psat6g200960 Pisum sativum
PSO478G3778 Papaver somniferum
PSO782G1152 Papaver somniferum
QL09p014981 Quercus lobata
RcHm_v2.0_Chr1g0376731 Rosa chinensis
RcHm_v2.0_Chr1g0376771 Rosa chinensis
Rhsim03G0177300 Rhododendron simsii
Sabra15G0147400 Salix brachista
SalBow1G7635 Salvia bowleyana
SalBow7G3722 Salvia bowleyana
Sed0016287 Sechium edule
SEGI_11434 Sequoiadendron giganteum
SMO367G0247 Selaginella moellendorffii
SMO367G1305 Selaginella moellendorffii
Solyc03g026210.4 Solanum lycopersicum
Sopen03g005080 Solanum pennellii
Sp6g14350 Schrenkiella parvula
SpUn0060_0040 Schrenkiella parvula
TAR374G0336 Trochodendron aralioides
TAR375G0526 Trochodendron aralioides
THA.LOC104811994 Tarenaya hassleriana
Thecc.03G170800 Theobroma cacao
Thhalv10014460m.g Eutrema salsugineum
TPR.G17430 Trifolium pratense
TWI23G0201 Tripterygium wilfordii
unitig_0.g2488 Utricularia gibba
vmacro06720 Vaccinium macrocarpon
vmacro06722 Vaccinium macrocarpon
VMungo0464G0141 Vigna mungo
VMungo0720G1210 Vigna mungo
VMungo1127G1192 Vigna mungo
Zm00001eb001140 Zea mays

User provided reference genes

Program Settings