Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p38280 Brassica napus
Aa31LG3G4180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3104 Anthoceros agrestis
Actinidia07803 Actinidia chinensis
Ah.16g104190 Amaranthus hybridus
AL3G22510 Arabidopsis lyrata
Aqoxy4G02353 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.S9XQPV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SGI3UP Arachis hypogaea
AT3G10970 Arabidopsis thaliana
ATR0681G120 Amborella trichopoda
Atru.chr12.150 Acer truncatum
AUR62012353 Chenopodium quinoa
AUR62043569 Chenopodium quinoa
AUR62044187 Chenopodium quinoa
BcaB04g21162 Brassica carinata
BcaB06g25666 Brassica carinata
BcaC05g29416 Brassica carinata
BcaC09g48143 Brassica carinata
BolC1t05342H Brassica oleracea
BolC5t34373H Brassica oleracea
BraA01t04211Z Brassica rapa
BraA05t22620Z Brassica rapa
C05p57100 Brassica napus
CAN.G251.1 Capsicum annuum
CANSAT56G3104 Cannabis sativa
CARHR085550 Cardamine hirsuta
Carub.0003s1024 Capsella rubella
Ca_15186_v3 Cicer arietinum L.
Ca_15187_v3 Cicer arietinum L.
Cc02_g05580 Coffea canephora
CDE04G0773 Ceratophyllum demersum
CDE06G0652 Ceratophyllum demersum
Cfa001227 Carpinus fangiana
Ciclev10031841m.g Citrus clementina
CiPaw.01G304700 Carya illinoinensis
CiPaw.02G198000 Carya illinoinensis
ClCG07G004890 Citrullus lanatus
COL.COLO4_00092 Corchorus olitorius
COL.COLO4_26867 Corchorus olitorius
Cpa.g.sc19.87 Carica papaya
Cre08.g360801 Chlamydomonas reinhardtii
CsaV3_5G010790 Cucumis sativus L.
CSS0005641 Camellia sinensis var. sinensis
CSS0024669 Camellia sinensis var. sinensis
DCAR_019810 Daucus carota
Dinv21825 Davidia involucrata
Dinv21826 Davidia involucrata
Duzib114G0113 Durio zibethinus
Duzib187G1301 Durio zibethinus
ECA233G3100 Erigeron canadensis
EL10Ac2g04264 Beta vulgaris
Eucgr.G03124 Eucalyptus grandis
FAN01G2489 Fragaria x ananassa
FAN03G1156 Fragaria x ananassa
FAN06G2388 Fragaria x ananassa
FAN10G3250 Fragaria x ananassa
FAN26G2109 Fragaria x ananassa
FvH4_7g25610 Fragaria vesca
Glyma.11G235500 Glycine max
Glyma.18G021400 Glycine max
Gohir.A05G279700 Gossypium hirsutum
Gohir.D05G281300 Gossypium hirsutum
Gorai.009G294700 Gossypium raimondii
GSVIVG01032711001 Vitis vinifera
HanXRQChr06g0167361 Helianthus annuus
HanXRQChr08g0222551 Helianthus annuus
HanXRQChr17g0560781 Helianthus annuus
Haze_17335 Corylus avellana
Hma1.2p1_0292F.1_g115770 Hydrangea macrophylla
Hma1.2p1_0292F.1_g115780 Hydrangea macrophylla
HPP92_025120 Vanilla planifolia
Hund13473 Selenicereus undatus
Lalb_Chr08g0231321 Lupinus albus
Lalb_Chr23g0277221 Lupinus albus
Lj6g0027393 Lotus japonicus
Lj8C57T12 Lonicera japonica
Lsat_1_v5_gn_8_13460 Lactuca sativa
Manes.07G138100 Manihot esculenta
Manes.10G005400 Manihot esculenta
Mapoly0051s0069 Marchantia polymorpha
MBI15_g22073_MAGBIO Magnolia biondii
MD01G1163400 Malus domestica
MD07G1231400 Malus domestica
Medtr3g072340 Medicago truncatula
MELO3C020118.2 Cucumis melo
Migut.F00589 Erythranthe guttata
MSTRG.27277 Avicennia marina
Nitab4.5_0000263g0260 Nicotiana tabacum
Nitab4.5_0002713g0050 Nicotiana tabacum
Nn1g06183 Nelumbo nucifera
Nn2g10360 Nelumbo nucifera
Nn3g17786 Nelumbo nucifera
Oeu020115.1 Olea europaea
Oeu036529.1 Olea europaea
Oeu040824.1 Olea europaea
Os05g0168300 Oryza sativa ssp. japonica
Peaxi162Scf00464g00016 Petunia axillaris
PGR142G0245 Punica granatum
Phvul.001G248900 Phaseolus vulgaris
Potri.019G049000 Populus trichocarpa
Pp3c1_33360 Physcomitrium patens
Prupe.2G261400 Prunus persica
Psat5g131560 Pisum sativum
PSO017G6961 Papaver somniferum
PSO170G0859 Papaver somniferum
PSO170G4626 Papaver somniferum
QL08p064521 Quercus lobata
RcHm_v2.0_Chr1g0371751 Rosa chinensis
Rhsim09G0183900 Rhododendron simsii
Sabra19G0058500 Salix brachista
SalBow3G0966 Salvia bowleyana
Sc11g0005710 Simmondsia chinensis
Sed0018034 Sechium edule
Sed0024675 Sechium edule
SEGI_10893 Sequoiadendron giganteum
SGA_v2.0_scaffold60G20910 Striga asiatica
SMO117G0217 Selaginella moellendorffii
Solyc06g050310.3 Solanum lycopersicum
Sopen06g015810 Solanum pennellii
Sp3g09300 Schrenkiella parvula
TAR633G2075 Trochodendron aralioides
THA.LOC104823175 Tarenaya hassleriana
THA.LOC104826835 Tarenaya hassleriana
Thecc.10G175200 Theobroma cacao
Thhalv10020975m.g Eutrema salsugineum
TPR.G31620 Trifolium pratense
TWI73G0552 Tripterygium wilfordii
unitig_0.g1648 Utricularia gibba
vmacro09978 Vaccinium macrocarpon
VMungo1383G3668 Vigna mungo
Zm00001eb282030 Zea mays

User provided reference genes

Program Settings