Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p40910 Brassica napus
A05p30640 Brassica napus
Aa31LG8G5780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3883 Anthoceros agrestis
Actinidia17837 Actinidia chinensis
Actinidia27921 Actinidia chinensis
Ah.01g019810 Amaranthus hybridus
AL3G32330 Arabidopsis lyrata
Aqoxy5G01754 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EU6551 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JZQ5CR Arachis hypogaea
AT3G18940 Arabidopsis thaliana
ATR0733G151 Amborella trichopoda
Atru.chr5.2901 Acer truncatum
Atru.chr5.2902 Acer truncatum
AUR62011394 Chenopodium quinoa
BcaB04g19013 Brassica carinata
BcaB04g20743 Brassica carinata
BcaB06g25946 Brassica carinata
BcaC01g03666 Brassica carinata
BolC3t17285H Brassica oleracea
BolC5t33380H Brassica oleracea
BraA03t13250Z Brassica rapa
BraA05t21906Z Brassica rapa
C03p49920 Brassica napus
C05p46520 Brassica napus
CAN.G322.90 Capsicum annuum
CANSAT25G2034 Cannabis sativa
CARHR094360 Cardamine hirsuta
Carub.0003s1876 Capsella rubella
Ca_20823_v3 Cicer arietinum L.
CBR_g26043 Chara braunii
Cc02_g18140 Coffea canephora
CDE01G0621 Ceratophyllum demersum
Cfa004956 Carpinus fangiana
Ciclev10029009m.g Citrus clementina
CiPaw.05G059200 Carya illinoinensis
ClCG02G005470 Citrullus lanatus
COL.COLO4_17783 Corchorus olitorius
Cpa.g.sc62.88 Carica papaya
Cre09.g399589 Chlamydomonas reinhardtii
CsaV3_7G010150 Cucumis sativus L.
DCAR_003633 Daucus carota
Dinv23574 Davidia involucrata
Duzib248G1621 Durio zibethinus
ECA234G0394 Erigeron canadensis
EL10Ac9g21785 Beta vulgaris
Eucgr.I01229 Eucalyptus grandis
FAN04G2258 Fragaria x ananassa
FAN08G3356 Fragaria x ananassa
FAN13G1680 Fragaria x ananassa
FAN18G0119 Fragaria x ananassa
FAN18G1621 Fragaria x ananassa
FAN20G1704 Fragaria x ananassa
FvH4_2g07422 Fragaria vesca
FvH4_5g16250 Fragaria vesca
FvH4_5g27360 Fragaria vesca
Glyma.11G122900 Glycine max
Glyma.12G047700 Glycine max
Gohir.A03G214300 Gossypium hirsutum
Gohir.D02G235800 Gossypium hirsutum
Gorai.005G263900 Gossypium raimondii
GSVIVG01026784001 Vitis vinifera
GSVIVG01031883001 Vitis vinifera
HanXRQChr10g0307581 Helianthus annuus
Haze_02451 Corylus avellana
Haze_02453 Corylus avellana
Hma1.2p1_0584F.1_g183295 Hydrangea macrophylla
HPP92_015723 Vanilla planifolia
Hund00298 Selenicereus undatus
Hund00305 Selenicereus undatus
Lalb_Chr01g0002931 Lupinus albus
Lj3g0007485 Lotus japonicus
Lj9C365T5 Lonicera japonica
Lsat_1_v5_gn_5_117341 Lactuca sativa
Manes.17G097200 Manihot esculenta
Mapoly0073s0081 Marchantia polymorpha
MBI16_g31334_MAGBIO Magnolia biondii
MCO11G864 Micromonas commoda
MD10G1085900 Malus domestica
Medtr4g068475 Medicago truncatula
MELO3C018414.2 Cucumis melo
Migut.N01222 Erythranthe guttata
MSTRG.27750 Avicennia marina
Nitab4.5_0008189g0020 Nicotiana tabacum
Nitab4.5_0012894g0020 Nicotiana tabacum
Nn6g32156 Nelumbo nucifera
Oeu034077.1 Olea europaea
Os03g0766900 Oryza sativa ssp. japonica
Peaxi162Scf00016g01229 Petunia axillaris
PGR142G0964 Punica granatum
PGSC0003DMG400025833 Solanum tuberosum
Phvul.011G049700 Phaseolus vulgaris
Potri.004G148500 Populus trichocarpa
Potri.004G148700 Populus trichocarpa
Pp3c2_22470 Physcomitrium patens
Pp3c2_22478 Physcomitrium patens
Prupe.8G110200 Prunus persica
Psat7g207080 Pisum sativum
PSO170G4903 Papaver somniferum
PSO700G0338 Papaver somniferum
QL09p038983 Quercus lobata
QL11p039405 Quercus lobata
RcHm_v2.0_Chr6g0260971 Rosa chinensis
RcHm_v2.0_Chr6g0261021 Rosa chinensis
RcHm_v2.0_Chr7g0218511 Rosa chinensis
Rhsim05G0078300 Rhododendron simsii
Sabra04G0098600 Salix brachista
SalBow1G0951 Salvia bowleyana
SalBow3G3631 Salvia bowleyana
Sc14g0001730 Simmondsia chinensis
Sed0018300 Sechium edule
SEGI_01484 Sequoiadendron giganteum
SEGI_41274 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06566 Striga asiatica
SGA_v2.0_scaffold55G19820 Striga asiatica
SMO115G0183 Selaginella moellendorffii
SMO115G0205 Selaginella moellendorffii
Solyc01g109130.3 Solanum lycopersicum
Sopen01g051330 Solanum pennellii
Sp3g17030 Schrenkiella parvula
TAR628G0202 Trochodendron aralioides
THA.LOC104803449 Tarenaya hassleriana
Thecc.02G029300 Theobroma cacao
Thhalv10021280m.g Eutrema salsugineum
TPR.G10224 Trifolium pratense
TWI31G0896 Tripterygium wilfordii
unitig_8.g3429 Utricularia gibba
vmacro22671 Vaccinium macrocarpon
VMungo1127G2028 Vigna mungo
Zm00001eb058630 Zea mays
Zm00001eb214010 Zea mays

User provided reference genes

Program Settings