Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p43880 Brassica napus
Aa31LG5G13800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5471 Anthoceros agrestis
Actinidia03247 Actinidia chinensis
Actinidia06786 Actinidia chinensis
Actinidia06787 Actinidia chinensis
Ah.04g159240 Amaranthus hybridus
Ah.06g195310 Amaranthus hybridus
AL3G12930 Arabidopsis lyrata
AL3G13260 Arabidopsis lyrata
Aqoxy2G04094 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.25XALN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.51VLQD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VQ08NH Arachis hypogaea
AT3G03305 Arabidopsis thaliana
ATR0564G177 Amborella trichopoda
ATR0824G241 Amborella trichopoda
Atru.chr12.1656 Acer truncatum
Atru.chr12.1657 Acer truncatum
Atru.chr12.1658 Acer truncatum
Atru.chr12.1663 Acer truncatum
Atru.chr12.1669 Acer truncatum
Atru.chr12.1695 Acer truncatum
Atru.chr12.1696 Acer truncatum
AUR62014468 Chenopodium quinoa
AUR62034530 Chenopodium quinoa
BolC5t35012H Brassica oleracea
BraA05t23125Z Brassica rapa
C05p63470 Brassica napus
CAN.G321.22 Capsicum annuum
CANSAT21G0310 Cannabis sativa
CARHR077340 Cardamine hirsuta
Carub.0003s0247 Capsella rubella
Ca_08014_v3 Cicer arietinum L.
Cc09_g04040 Coffea canephora
CDE02G4030 Ceratophyllum demersum
CDE06G0114 Ceratophyllum demersum
CDE07G1406 Ceratophyllum demersum
CDE09G0389 Ceratophyllum demersum
Cfa006234 Carpinus fangiana
Ciclev10011172m.g Citrus clementina
Ciclev10013254m.g Citrus clementina
Ciclev10023289m.g Citrus clementina
CiPaw.07G083600 Carya illinoinensis
ClCG11G012400 Citrullus lanatus
COL.COLO4_36605 Corchorus olitorius
Cpa.g.sc99.42 Carica papaya
Cre11.g478456 Chlamydomonas reinhardtii
CsaV3_2G010290 Cucumis sativus L.
CSS0002064 Camellia sinensis var. sinensis
DCAR_031594 Daucus carota
Dinv21358 Davidia involucrata
Duzib128G1624 Durio zibethinus
ECA232G3428 Erigeron canadensis
EL10Ac4g10017 Beta vulgaris
Eucgr.B01459 Eucalyptus grandis
FvH4_6g00140 Fragaria vesca
Glyma.09G248100 Glycine max
Glyma.18G244700 Glycine max
Gohir.A02G106500 Gossypium hirsutum
Gohir.D03G071400 Gossypium hirsutum
Gorai.003G088600 Gossypium raimondii
GSVIVG01003759001 Vitis vinifera
HanXRQChr10g0283011 Helianthus annuus
Haze_04596 Corylus avellana
HPP92_013562 Vanilla planifolia
HPP92_028167 Vanilla planifolia
Hund21927 Selenicereus undatus
Lalb_Chr03g0038141 Lupinus albus
Lj1g0007040 Lotus japonicus
Lj8A198T52 Lonicera japonica
Lsat_1_v5_gn_0_14641 Lactuca sativa
Manes.12G002100 Manihot esculenta
Mapoly0048s0028 Marchantia polymorpha
MBI08_g20603_MAGBIO Magnolia biondii
MBI12_g21502_MAGBIO Magnolia biondii
MD04G1248000 Malus domestica
MD04G1248100 Malus domestica
MD04G1248200 Malus domestica
MD12G1262500 Malus domestica
Medtr7g080490 Medicago truncatula
MELO3C008611.2 Cucumis melo
Migut.F02096 Erythranthe guttata
MSTRG.27409 Avicennia marina
Nitab4.5_0001003g0070 Nicotiana tabacum
Nitab4.5_0001853g0060 Nicotiana tabacum
Nitab4.5_0001853g0070 Nicotiana tabacum
Nitab4.5_0009631g0020 Nicotiana tabacum
Nn013s41460 Nelumbo nucifera
Nn1g09626 Nelumbo nucifera
Oeu034703.2 Olea europaea
Os01g0894000 Oryza sativa ssp. japonica
Os03g0260100 Oryza sativa ssp. japonica
Os07g0274100 Oryza sativa ssp. japonica
Peaxi162Scf00296g01112 Petunia axillaris
PGR031G2609 Punica granatum
PGSC0003DMG400016251 Solanum tuberosum
Phvul.008G051900 Phaseolus vulgaris
Potri.008G077000 Populus trichocarpa
Potri.010G180800 Populus trichocarpa
Pp3c20_18430 Physcomitrium patens
Pp3c23_21040 Physcomitrium patens
Pp3c8_13610 Physcomitrium patens
Prupe.6G364500 Prunus persica
Psat3g105160 Pisum sativum
PSO675G7036 Papaver somniferum
PSO732G0688 Papaver somniferum
QL10p015972 Quercus lobata
RcHm_v2.0_Chr3g0447491 Rosa chinensis
Rhsim05G0165000 Rhododendron simsii
Sabra08G0057400 Salix brachista
Sabra10G0138600 Salix brachista
SalBow1G1244 Salvia bowleyana
SalBow1G7804 Salvia bowleyana
Sc16g0010600 Simmondsia chinensis
Sed0021637 Sechium edule
SGA_v2.0_scaffold62G21491 Striga asiatica
SMO228G0200 Selaginella moellendorffii
Solyc11g008570.2 Solanum lycopersicum
Sopen11g004360 Solanum pennellii
Sp3g02330 Schrenkiella parvula
TAR365G1048 Trochodendron aralioides
THA.LOC104827232 Tarenaya hassleriana
Thecc.05G188500 Theobroma cacao
Thhalv10020144m.g Eutrema salsugineum
TPR.G31231 Trifolium pratense
TWI18G0568 Tripterygium wilfordii
unitig_46.g18570 Utricularia gibba
vmacro19542 Vaccinium macrocarpon
VMungo1383G0851 Vigna mungo
Zm00001eb144980 Zea mays
Zm00001eb398210 Zea mays

User provided reference genes

Program Settings