Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p14700 Brassica napus
A07p32170 Brassica napus
Aa31LG10G3720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2043 Anthoceros agrestis
Actinidia20108 Actinidia chinensis
Ah.03g138110 Amaranthus hybridus
AL2G26830 Arabidopsis lyrata
Aqoxy3G04113 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.043Q1E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.05ZMZX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.62WV2A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B3UXS8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F0VD4J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P482X0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QG6U7W Arachis hypogaea
AT1G68080 Arabidopsis thaliana
ATR0598G299 Amborella trichopoda
Atru.chr11.736 Acer truncatum
AUR62002964 Chenopodium quinoa
AUR62007770 Chenopodium quinoa
BcaB02g11286 Brassica carinata
BcaB03g15398 Brassica carinata
BcaB05g23450 Brassica carinata
BcaC08g45997 Brassica carinata
BcaC08g45999 Brassica carinata
BolC2t08514H Brassica oleracea
BolC6t38893H Brassica oleracea
BraA02t06537Z Brassica rapa
BraA07t30847Z Brassica rapa
C02p23820 Brassica napus
C06p37940 Brassica napus
CAN.G282.103 Capsicum annuum
CANSAT78G1412 Cannabis sativa
CARHR060740 Cardamine hirsuta
Carub.0002s1456 Capsella rubella
Ca_11580_v3 Cicer arietinum L.
CBR_g16882 Chara braunii
Cc11_g05840 Coffea canephora
CDE05G0039 Ceratophyllum demersum
CDE11G0599 Ceratophyllum demersum
Cfa015069 Carpinus fangiana
Ciclev10015473m.g Citrus clementina
CiPaw.06G059000 Carya illinoinensis
ClCG11G001170 Citrullus lanatus
COL.COLO4_27589 Corchorus olitorius
Cpa.g.sc2.132 Carica papaya
Cre12.g486551 Chlamydomonas reinhardtii
CsaV3_5G013220 Cucumis sativus L.
CSS0037760 Camellia sinensis var. sinensis
CSS0049283 Camellia sinensis var. sinensis
DCAR_026820 Daucus carota
Duzib248G0719 Durio zibethinus
ECA234G0994 Erigeron canadensis
EL10Ac6g14554 Beta vulgaris
Eucgr.B02658 Eucalyptus grandis
FAN07G1633 Fragaria x ananassa
FAN12G4156 Fragaria x ananassa
FAN17G1819 Fragaria x ananassa
FAN22G1644 Fragaria x ananassa
FvH4_4g33040 Fragaria vesca
Glyma.05G138500 Glycine max
Glyma.08G093700 Glycine max
Gohir.A04G143900 Gossypium hirsutum
Gohir.D04G188200 Gossypium hirsutum
Gorai.012G183700 Gossypium raimondii
GSVIVG01011600001 Vitis vinifera
HanXRQChr17g0566161 Helianthus annuus
Haze_10819 Corylus avellana
Haze_10820 Corylus avellana
HPP92_016714 Vanilla planifolia
Hund05787 Selenicereus undatus
Lalb_Chr13g0293631 Lupinus albus
Lj3A860T49 Lonicera japonica
Lj4g0028223 Lotus japonicus
Lsat_1_v5_gn_4_23861 Lactuca sativa
Manes.17G088400 Manihot esculenta
Manes.17G089020 Manihot esculenta
Manes.18G025338 Manihot esculenta
Mapoly0075s0019 Marchantia polymorpha
MBI19_g25220_MAGBIO Magnolia biondii
MCO06G046 Micromonas commoda
MD16G1013700 Malus domestica
Medtr1g102140 Medicago truncatula
MELO3C020028.2 Cucumis melo
Migut.L00620 Erythranthe guttata
Migut.O00731 Erythranthe guttata
MSTRG.418 Avicennia marina
Nitab4.5_0000521g0110 Nicotiana tabacum
Nitab4.5_0001294g0040 Nicotiana tabacum
Nitab4.5_0001294g0050 Nicotiana tabacum
Nitab4.5_0001935g0050 Nicotiana tabacum
Nn4g24501 Nelumbo nucifera
Oeu031680.1 Olea europaea
Oeu034664.1 Olea europaea
Os03g0238700 Oryza sativa ssp. japonica
Peaxi162Scf01111g00310 Petunia axillaris
PGR102G1589 Punica granatum
PGSC0003DMG400022790 Solanum tuberosum
Phvul.002G181600 Phaseolus vulgaris
Potri.008G139000 Populus trichocarpa
Pp3c27_7680 Physcomitrium patens
PRCOL_00005504 Prasinoderma coloniale
Prupe.1G337400 Prunus persica
Psat7g084400 Pisum sativum
PSO017G1338 Papaver somniferum
PSO478G3575 Papaver somniferum
QL03p038994 Quercus lobata
RcHm_v2.0_Chr4g0442081 Rosa chinensis
Rhsim09G0086000 Rhododendron simsii
Sabra08G0105600 Salix brachista
SalBow7G4797 Salvia bowleyana
Sc10g0003730 Simmondsia chinensis
Sed0026869 Sechium edule
SEGI_24854 Sequoiadendron giganteum
SEGI_26303 Sequoiadendron giganteum
SGA_v2.0_scaffold57G20105 Striga asiatica
SHI04278 Sapria himalayana
Solyc01g005100.4 Solanum lycopersicum
Sopen01g001120 Solanum pennellii
Sp5g23080 Schrenkiella parvula
TAR622G0311 Trochodendron aralioides
THA.LOC104809799 Tarenaya hassleriana
Thecc.02G304700 Theobroma cacao
Thhalv10018688m.g Eutrema salsugineum
TPR.G5128 Trifolium pratense
TWI74G0639 Tripterygium wilfordii
unitig_748.g7591 Utricularia gibba
VMungo0251G2725 Vigna mungo
VMungo0251G3333 Vigna mungo
Zm00001eb371330 Zea mays
Zm00001eb399130 Zea mays

User provided reference genes

Program Settings