Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p17260 Brassica napus
Aa31LG4G8950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3190 Anthoceros agrestis
Ah.05g168190 Amaranthus hybridus
AL2G31250 Arabidopsis lyrata
Aqoxy6G00427 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9JVG50 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TV90AE Arachis hypogaea
AT1G71696 Arabidopsis thaliana
Atru.chr13.2001 Acer truncatum
AUR62026635 Chenopodium quinoa
AUR62034891 Chenopodium quinoa
BcaB05g24658 Brassica carinata
BcaC03g15284 Brassica carinata
BolC2t08936H Brassica oleracea
BolC2t08937H Brassica oleracea
BraA02t06773Z Brassica rapa
BraA02t06774Z Brassica rapa
C02p28900 Brassica napus
CAN.G1252.3 Capsicum annuum
CANSAT25G0895 Cannabis sativa
CARHR291100 Cardamine hirsuta
Carub.0002s1845 Capsella rubella
Ca_10662_v3 Cicer arietinum L.
CBR_g24397 Chara braunii
CBR_g30849 Chara braunii
Cc10_g15280 Coffea canephora
CDE04G2034 Ceratophyllum demersum
Cfa018279 Carpinus fangiana
Ciclev10003457m.g Citrus clementina
Ciclev10003529m.g Citrus clementina
CiPaw.15G012300 Carya illinoinensis
ClCG08G007340 Citrullus lanatus
COL.COLO4_13778 Corchorus olitorius
Cpa.g.sc26.80 Carica papaya
Cre06.g309450 Chlamydomonas reinhardtii
Cre07.g335900 Chlamydomonas reinhardtii
CsaV3_6G004990 Cucumis sativus L.
CSS0006668 Camellia sinensis var. sinensis
DCAR_001188 Daucus carota
Duzib093G1718 Durio zibethinus
Duzib116G0900 Durio zibethinus
ECA247G3881 Erigeron canadensis
EL10Ac1g01606 Beta vulgaris
Eucgr.F04188 Eucalyptus grandis
Eucgr.L02800 Eucalyptus grandis
FAN15G3525 Fragaria x ananassa
FAN20G2564 Fragaria x ananassa
FAN24G0054 Fragaria x ananassa
FAN27G2380 Fragaria x ananassa
FvH4_2g13020 Fragaria vesca
Glyma.10G221400 Glycine max
Glyma.20G170200 Glycine max
Gohir.A05G270866 Gossypium hirsutum
Gohir.D05G273101 Gossypium hirsutum
Gorai.009G286300 Gossypium raimondii
GSVIVG01001409001 Vitis vinifera
HanXRQChr02g0042431 Helianthus annuus
Haze_17806 Corylus avellana
Hma1.2p1_0358F.1_g134830 Hydrangea macrophylla
Hma1.2p1_0358F.1_g134840 Hydrangea macrophylla
HPP92_000638 Vanilla planifolia
HPP92_000681 Vanilla planifolia
Hund26678 Selenicereus undatus
Lalb_Chr02g0141581 Lupinus albus
Lalb_Chr06g0161731 Lupinus albus
Lj4A704G63 Lonicera japonica
Lj5g0014499 Lotus japonicus
Lj7A383T42 Lonicera japonica
Lsat_1_v5_gn_1_5181 Lactuca sativa
Manes.02G183400 Manihot esculenta
Mapoly0096s0032 Marchantia polymorpha
MBI01_g34168_MAGBIO Magnolia biondii
MCO15G195 Micromonas commoda
MD05G1033700 Malus domestica
MD10G1034600 Malus domestica
Medtr1g097955 Medicago truncatula
MELO3C019977.2 Cucumis melo
Migut.N02950 Erythranthe guttata
MSTRG.22109 Avicennia marina
MSTRG.24492 Avicennia marina
Nitab4.5_0000099g0240 Nicotiana tabacum
Nitab4.5_0013157g0020 Nicotiana tabacum
Nn5g28835 Nelumbo nucifera
Oeu017621.1 Olea europaea
Os06g0144600 Oryza sativa ssp. japonica
Peaxi162Scf00360g00056 Petunia axillaris
PGR044G0568 Punica granatum
Phvul.007G083600 Phaseolus vulgaris
Potri.005G197000 Populus trichocarpa
Pp3c16_14030 Physcomitrium patens
Pp3c27_7150 Physcomitrium patens
Pp3c6_12100 Physcomitrium patens
PRCOL_00005633 Prasinoderma coloniale
Prupe.8G040700 Prunus persica
Prupe.8G040900 Prunus persica
Psat0s899g0040 Pisum sativum
PSO675G2388 Papaver somniferum
QL02p037446 Quercus lobata
QL02p037460 Quercus lobata
QL02p037946 Quercus lobata
QL02p037958 Quercus lobata
RcHm_v2.0_Chr6g0274201 Rosa chinensis
Rhsim11G0087800 Rhododendron simsii
Sabra02G0051300 Salix brachista
Sabra05G0149900 Salix brachista
SalBow6G1744 Salvia bowleyana
Sc02g0003820 Simmondsia chinensis
Sed0007537 Sechium edule
SEGI_16149 Sequoiadendron giganteum
SEGI_19500 Sequoiadendron giganteum
SEGI_33860 Sequoiadendron giganteum
SEGI_33895 Sequoiadendron giganteum
SGA_v2.0_scaffold54G19682 Striga asiatica
SHI09097 Sapria himalayana
SHI09099 Sapria himalayana
SMO116G0063 Selaginella moellendorffii
Solyc04g072010.3 Solanum lycopersicum
Sopen04g027990 Solanum pennellii
Sp5g26720 Schrenkiella parvula
TAR381G0629 Trochodendron aralioides
Thecc.08G159700 Theobroma cacao
Thhalv10018610m.g Eutrema salsugineum
TPR.G17011 Trifolium pratense
TWI32G1095 Tripterygium wilfordii
unitig_578.g16229 Utricularia gibba
vmacro01494 Vaccinium macrocarpon
VMungo0720G0456 Vigna mungo
Zm00001eb035610 Zea mays
Zm00001eb035620 Zea mays
Zm00001eb246880 Zea mays
Zm00001eb377250 Zea mays

User provided reference genes

Program Settings