Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p26870 Brassica napus
Aa31LG9G14240 Aethionema arabicum
Actinidia03473 Actinidia chinensis
Actinidia29463 Actinidia chinensis
AL6G42090 Arabidopsis lyrata
Aqoxy6G00210 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GZGN8Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QU4SLQ Arachis hypogaea
AT4G08320 Arabidopsis thaliana
ATR0584G080 Amborella trichopoda
Atru.chr13.1453_Atru.chr13.1454 Acer truncatum
Atru.chr13.1476_Atru.chr13.1477 Acer truncatum
AUR62014341 Chenopodium quinoa
AUR62019083 Chenopodium quinoa
BcaB05g23941 Brassica carinata
BcaC03g16447 Brassica carinata
BolSC33t60638H Brassica oleracea
BraA02t07698Z Brassica rapa
C02p42670 Brassica napus
CAN.G127.17 Capsicum annuum
CANSAT25G3381 Cannabis sativa
CARHR259410 Cardamine hirsuta
Carub.0006s2688 Capsella rubella
CBR_g88565 Chara braunii
Cc10_g11840 Coffea canephora
CDE07G1786 Ceratophyllum demersum
CDE09G0226 Ceratophyllum demersum
Cfa026317 Carpinus fangiana
Ciclev10001211m.g Citrus clementina
CiPaw.06G030600 Carya illinoinensis
ClCG11G015770 Citrullus lanatus
COL.COLO4_35924 Corchorus olitorius
Cpa.g.sc64.83 Carica papaya
CsaV3_4G028230 Cucumis sativus L.
CSS0013202 Camellia sinensis var. sinensis
CSS0031690 Camellia sinensis var. sinensis
CSS0035403 Camellia sinensis var. sinensis
DCAR_014089 Daucus carota
Dinv07224 Davidia involucrata
Duzib093G1431 Durio zibethinus
Duzib116G0551 Durio zibethinus
ECA246G2944 Erigeron canadensis
EL10Ac1g01005 Beta vulgaris
Eucgr.F03788 Eucalyptus grandis
FAN20G1415 Fragaria x ananassa
FAN20G3053 Fragaria x ananassa
FAN24G0658 Fragaria x ananassa
FAN24G1536 Fragaria x ananassa
FAN27G1284 Fragaria x ananassa
FvH4_2g26830 Fragaria vesca
FvH4_2g26840 Fragaria vesca
Glyma.13G080100 Glycine max
Glyma.14G149300 Glycine max
Gohir.A05G234800 Gossypium hirsutum
Gohir.A06G044066 Gossypium hirsutum
Gohir.A06G044132 Gossypium hirsutum
Gohir.D01G127300 Gossypium hirsutum
Gohir.D05G237100 Gossypium hirsutum
Gohir.D06G045000 Gossypium hirsutum
Gohir.D06G045101 Gossypium hirsutum
Gorai.009G245500 Gossypium raimondii
Gorai.010G050100 Gossypium raimondii
HanXRQChr05g0151131 Helianthus annuus
HanXRQChr12g0356211 Helianthus annuus
Haze_00449 Corylus avellana
Hma1.2p1_0186F.1_g081770 Hydrangea macrophylla
Hma1.2p1_0186F.1_g081780 Hydrangea macrophylla
HPP92_011946 Vanilla planifolia
HPP92_011965 Vanilla planifolia
Hund26813 Selenicereus undatus
Lalb_Chr10g0101741 Lupinus albus
Lalb_Chr20g0123481 Lupinus albus
Lj1g0027048 Lotus japonicus
Lj4A625G10 Lonicera japonica
Lj4A625G9 Lonicera japonica
Lj4g0027954 Lotus japonicus
Lj4g0027975 Lotus japonicus
Lj6g0001663 Lotus japonicus
Lsat_1_v5_gn_6_112921 Lactuca sativa
Manes.18G076800 Manihot esculenta
Mapoly0102s0012 Marchantia polymorpha
MCO14G458 Micromonas commoda
MD15G1349900 Malus domestica
Medtr1639s0010 Medicago truncatula
Medtr1g030300 Medicago truncatula
MELO3C010480.2 Cucumis melo
Migut.C01133 Erythranthe guttata
MSTRG.1445 Avicennia marina
Nitab4.5_0001273g0050 Nicotiana tabacum
Nitab4.5_0001803g0120 Nicotiana tabacum
Nn1g08776 Nelumbo nucifera
Nn1g08784 Nelumbo nucifera
Nn1g08786 Nelumbo nucifera
Oeu017295.1 Olea europaea
Oeu017297.1 Olea europaea
Os04g0690300 Oryza sativa ssp. japonica
Peaxi162Scf00914g00016 Petunia axillaris
PGR042G0443 Punica granatum
PGR042G3322 Punica granatum
PGR042G3885 Punica granatum
PGR142G1024 Punica granatum
Phvul.008G163200 Phaseolus vulgaris
Potri.005G177400 Populus trichocarpa
Prupe.1G499100 Prunus persica
Psat6g041000 Pisum sativum
PSO528G0030 Papaver somniferum
QL09p034927 Quercus lobata
QL09p034934 Quercus lobata
RcHm_v2.0_Chr6g0295691 Rosa chinensis
RhsimUnG0093000 Rhododendron simsii
Sabra05G0133900 Salix brachista
Sc02g0006050 Simmondsia chinensis
Sc02g0006060 Simmondsia chinensis
Sed0014256 Sechium edule
SEGI_11742 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10464 Striga asiatica
SMO134G0039 Selaginella moellendorffii
Solyc11g012900.3 Solanum lycopersicum
Sopen11g007640 Solanum pennellii
Sp6g09620 Schrenkiella parvula
TAR376G1095 Trochodendron aralioides
THA.LOC104817311 Tarenaya hassleriana
Thecc.08G124700 Theobroma cacao
Thhalv10028662m.g Eutrema salsugineum
TPR.G25796 Trifolium pratense
TWI56G1135 Tripterygium wilfordii
unitig_749.g13933 Utricularia gibba
vmacro00831 Vaccinium macrocarpon
vmacro12439 Vaccinium macrocarpon
VMungo0647G0482 Vigna mungo
Zm00001eb076340 Zea mays
Zm00001eb389760 Zea mays

User provided reference genes

Program Settings