Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05910 Brassica napus
Aa31LG2G19640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2892 Anthoceros agrestis
Actinidia01032 Actinidia chinensis
Actinidia31761 Actinidia chinensis
Ah.01g021910 Amaranthus hybridus
AL6G31440 Arabidopsis lyrata
Aqoxy3G02650 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7NV6YZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VH0MPJ Arachis hypogaea
AT5G19910 Arabidopsis thaliana
ATR1098G017 Amborella trichopoda
Atru.chr6.1973 Acer truncatum
Atru.chr6.592 Acer truncatum
AUR62015003 Chenopodium quinoa
AUR62029119 Chenopodium quinoa
BcaB08g36557 Brassica carinata
BcaC04g19397 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01960 Brassica napus
BolC2t06995H Brassica oleracea
BraA02t05543Z Brassica rapa
CAN.G297.9 Capsicum annuum
CAN.G706.26 Capsicum annuum
CANSAT56G4429 Cannabis sativa
CARHR192950 Cardamine hirsuta
Carub.0006s1828 Capsella rubella
Ca_10837_v3 Cicer arietinum L.
Cc00_g13060 Coffea canephora
CDE06G1827 Ceratophyllum demersum
CDE06G2153 Ceratophyllum demersum
Cfa025999 Carpinus fangiana
Ciclev10032791m.g Citrus clementina
CiPaw.07G182800 Carya illinoinensis
ClCG07G017200 Citrullus lanatus
COL.COLO4_37304 Corchorus olitorius
Cpa.g.sc13.218 Carica papaya
Cre12.g520850 Chlamydomonas reinhardtii
CsaV3_4G004400 Cucumis sativus L.
CSS0012195 Camellia sinensis var. sinensis
DCAR_014647 Daucus carota
Dinv07271 Davidia involucrata
Dinv21889 Davidia involucrata
Dinv34527 Davidia involucrata
Dinv34531 Davidia involucrata
ECA233G3320 Erigeron canadensis
EL10Ac5g12406 Beta vulgaris
EL10Ac9g22675 Beta vulgaris
Eucgr.A02936 Eucalyptus grandis
FAN01G2833 Fragaria x ananassa
FAN06G3885 Fragaria x ananassa
FAN08G1750 Fragaria x ananassa
FAN10G1904 Fragaria x ananassa
FAN11G3144 Fragaria x ananassa
FAN18G1579 Fragaria x ananassa
FAN21G1143 Fragaria x ananassa
FAN25G1847 Fragaria x ananassa
FvH4_5g39330 Fragaria vesca
FvH4_7g26530 Fragaria vesca
Glyma.10G242500 Glycine max
Glyma.20G151600 Glycine max
Gohir.A07G044800 Gossypium hirsutum
Gohir.D07G049300 Gossypium hirsutum
Gorai.001G052400 Gossypium raimondii
GSVIVG01024482001 Vitis vinifera
HanXRQChr03g0069461 Helianthus annuus
HanXRQChr08g0223361 Helianthus annuus
Haze_22228 Corylus avellana
Haze_27372 Corylus avellana
Hma1.2p1_1014F.1_g247870 Hydrangea macrophylla
Hma1.2p1_1014F.1_g247880 Hydrangea macrophylla
HPP92_020684 Vanilla planifolia
Hund13383 Selenicereus undatus
Lalb_Chr24g0402981 Lupinus albus
Lj5g0003841 Lotus japonicus
Lj8A49T46 Lonicera japonica
Lsat_1_v5_gn_8_11541 Lactuca sativa
Manes.06G129600 Manihot esculenta
Mapoly0098s0031 Marchantia polymorpha
MBI04_g13855_MAGBIO Magnolia biondii
MCO04G185 Micromonas commoda
MD01G1174300 Malus domestica
MD07G1241000 Malus domestica
Medtr1g102540 Medicago truncatula
MELO3C017626.2 Cucumis melo
Migut.F01212 Erythranthe guttata
MSTRG.8396 Avicennia marina
Nitab4.5_0000103g0220 Nicotiana tabacum
Nitab4.5_0003429g0010 Nicotiana tabacum
Nn6g33759 Nelumbo nucifera
Oeu046440.1 Olea europaea
Os07g0164600 Oryza sativa ssp. japonica
Os10g0564100 Oryza sativa ssp. japonica
Peaxi162Scf00073g01818 Petunia axillaris
PGR083G1688 Punica granatum
PGSC0003DMG401008332 Solanum tuberosum
PGSC0003DMG403008332 Solanum tuberosum
Phvul.007G063000 Phaseolus vulgaris
Potri.012G113400 Populus trichocarpa
Potri.015G110900 Populus trichocarpa
Pp3c13_24550 Physcomitrium patens
Pp3c26_180 Physcomitrium patens
PRCOL_00001580 Prasinoderma coloniale
Prupe.2G269700 Prunus persica
Psat6g202080 Pisum sativum
PSO063G1306 Papaver somniferum
PSO541G5205 Papaver somniferum
PSO675G3127 Papaver somniferum
PSO782G0331 Papaver somniferum
QL02p099223 Quercus lobata
QL09p027336 Quercus lobata
RcHm_v2.0_Chr1g0373201 Rosa chinensis
Sabra15G0132700 Salix brachista
SalBow2G0368 Salvia bowleyana
SalBow2G2523 Salvia bowleyana
Sc17g0004780 Simmondsia chinensis
SEGI_39874 Sequoiadendron giganteum
SGA_v2.0_scaffold136G34977 Striga asiatica
SGA_v2.0_scaffold69G23310 Striga asiatica
SMO197G0072 Selaginella moellendorffii
Solyc03g094030.4 Solanum lycopersicum
Solyc03g094070.4 Solanum lycopersicum
Sopen03g024920 Solanum pennellii
Sp6g24470 Schrenkiella parvula
THA.LOC104799659 Tarenaya hassleriana
Thecc.03G145100 Theobroma cacao
Thhalv10014735m.g Eutrema salsugineum
TPR.G26100 Trifolium pratense
TPR.G9644 Trifolium pratense
TWI39G0778 Tripterygium wilfordii
unitig_90.g27553 Utricularia gibba
vmacro09932 Vaccinium macrocarpon
VMungo0720G1184 Vigna mungo
Zm00001eb038950 Zea mays

User provided reference genes

Program Settings