Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p26820 Brassica napus
A07p44990 Brassica napus
Aa31LG4G980 Aethionema arabicum
Actinidia18238 Actinidia chinensis
Actinidia25450 Actinidia chinensis
Actinidia25458 Actinidia chinensis
Ah.05g171200 Amaranthus hybridus
Ah.05g171290 Amaranthus hybridus
AL2G40740 Arabidopsis lyrata
AL5G28080 Arabidopsis lyrata
Aqoxy7G03485 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea
AT1G80700 Arabidopsis thaliana
AT1G80980 Arabidopsis thaliana
ATR1120G130 Amborella trichopoda
Atru.chr6.915 Acer truncatum
AUR62022762 Chenopodium quinoa
AUR62027568 Chenopodium quinoa
BcaB02g07251 Brassica carinata
BcaC08g45335 Brassica carinata
BcaC08g47553 Brassica carinata
BolC3t13327H Brassica oleracea
BolC6t38110H Brassica oleracea
BolC6t40396H Brassica oleracea
BraA07t30325Z Brassica rapa
BraA07t32004Z Brassica rapa
C06p29450 Brassica napus
C06p53780 Brassica napus
CAN.G128.21 Capsicum annuum
CANSAT56G1340 Cannabis sativa
CARHR073810 Cardamine hirsuta
Carub.0002s2685 Capsella rubella
Ca_20554_v3 Cicer arietinum L.
CBR_g23038 Chara braunii
Cc04_g04930 Coffea canephora
CDE05G3202 Ceratophyllum demersum
Ciclev10026473m.g Citrus clementina
CiPaw.01G253100 Carya illinoinensis
ClCG00G004860 Citrullus lanatus
ClCG07G012140 Citrullus lanatus
COL.COLO4_26669 Corchorus olitorius
Cpa.g.sc0.147 Carica papaya
Cpa.g.sc44.40 Carica papaya
CsaV3_4G002020 Cucumis sativus L.
CSS0040460 Camellia sinensis var. sinensis
DCAR_016295 Daucus carota
Dinv21397 Davidia involucrata
Dinv23302 Davidia involucrata
Duzib235G0368 Durio zibethinus
ECA232G2243 Erigeron canadensis
EL10As5g23598 Beta vulgaris
Eucgr.J03100 Eucalyptus grandis
FAN08G0623 Fragaria x ananassa
FAN18G1559 Fragaria x ananassa
FvH4_5g29190 Fragaria vesca
Glyma.07G025532 Glycine max
Glyma.08G216900 Glycine max
Gohir.A09G090900 Gossypium hirsutum
Gohir.D09G090900 Gossypium hirsutum
Gorai.006G107100 Gossypium raimondii
GSVIVG01017558001 Vitis vinifera
GSVIVG01017559001 Vitis vinifera
HanXRQChr04g0107231 Helianthus annuus
HanXRQChr09g0274531 Helianthus annuus
Haze_16650 Corylus avellana
Haze_16651 Corylus avellana
HPP92_016367 Vanilla planifolia
Hund00452 Selenicereus undatus
Lalb_Chr01g0012181 Lupinus albus
Lj3g0003301 Lotus japonicus
Lsat_1_v5_gn_4_85741 Lactuca sativa
Lsat_1_v5_gn_9_86741 Lactuca sativa
Manes.11G064500 Manihot esculenta
Mapoly0140s0034 Marchantia polymorpha
MD03G1160000 Malus domestica
MD17G1221100 Malus domestica
Medtr4g006550 Medicago truncatula
Medtr8g060830 Medicago truncatula
MELO3C017835.2 Cucumis melo
Migut.D01097 Erythranthe guttata
MSTRG.4689 Avicennia marina
Nitab4.5_0000130g0160 Nicotiana tabacum
Nitab4.5_0001454g0070 Nicotiana tabacum
Nitab4.5_0004330g0010 Nicotiana tabacum
Nitab4.5_0009423g0020 Nicotiana tabacum
Nn2g12284 Nelumbo nucifera
Oeu008050.2 Olea europaea
Oeu033656.3 Olea europaea
Os08g0278100 Oryza sativa ssp. japonica
Peaxi162Scf00332g00322 Petunia axillaris
PGR102G1994 Punica granatum
PGR142G0337 Punica granatum
PGSC0003DMG400014193 Solanum tuberosum
Phvul.010G159800 Phaseolus vulgaris
Potri.001G047700 Populus trichocarpa
Potri.003G180500 Populus trichocarpa
Pp3c9_20610 Physcomitrium patens
Prupe.1G199000 Prunus persica
Prupe.7G069400 Prunus persica
Psat7g259880 Pisum sativum
PSO063G1890 Papaver somniferum
PSO339G3366 Papaver somniferum
PSO782G5373 Papaver somniferum
QL02p069532 Quercus lobata
QL05p035112 Quercus lobata
QL05p035114 Quercus lobata
RcHm_v2.0_Chr7g0221831 Rosa chinensis
Rhsim08G0207800 Rhododendron simsii
Sabra01G0033000 Salix brachista
SalBow6G5910 Salvia bowleyana
Sc12g0008470 Simmondsia chinensis
Sed0026009 Sechium edule
SEGI_14387 Sequoiadendron giganteum
SGA_v2.0_scaffold89G27484 Striga asiatica
SHI11251 Sapria himalayana
Solyc03g117090.3 Solanum lycopersicum
Sopen03g036000 Solanum pennellii
Sp5g35050 Schrenkiella parvula
TAR625G0573 Trochodendron aralioides
TAR625G0588 Trochodendron aralioides
TAR633G0597 Trochodendron aralioides
THA.LOC104812439 Tarenaya hassleriana
Thecc.06G038900 Theobroma cacao
Thhalv10019105m.g Eutrema salsugineum
TPR.G17738 Trifolium pratense
TPR.G38763 Trifolium pratense
TWI12G0041 Tripterygium wilfordii
TWI18G1314 Tripterygium wilfordii
unitig_736.g22803 Utricularia gibba
vmacro19042 Vaccinium macrocarpon
VMungo0331G1031 Vigna mungo
Zm00001eb174980 Zea mays

User provided reference genes

Program Settings