Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p66580 Brassica napus
A10p05770 Brassica napus
Aa31LG1G6450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis
Actinidia16099 Actinidia chinensis
Ah.15g099480 Amaranthus hybridus
AL1G17350 Arabidopsis lyrata
Aqoxy4G02545 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea
AT1G07210 Arabidopsis thaliana
ATR0681G105 Amborella trichopoda
Atru.chr3.4201 Acer truncatum
Atru.chr3.4202 Acer truncatum
AUR62001638 Chenopodium quinoa
AUR62020144 Chenopodium quinoa
BcaB07g33371 Brassica carinata
BcaC07g42020 Brassica carinata
BcaC07g42450 Brassica carinata
BcaC07g42451 Brassica carinata
BcaC07g42452 Brassica carinata
BolC5t29300H Brassica oleracea
BolC8t52604H Brassica oleracea
BraA09t41996Z Brassica rapa
BraA10t42838Z Brassica rapa
C05p05290 Brassica napus
C08p50760 Brassica napus
CAN.G324.3 Capsicum annuum
CANSAT56G2716 Cannabis sativa
CARHR006930 Cardamine hirsuta
CARHR102160 Cardamine hirsuta
Carub.0001s0651 Capsella rubella
CBR_g41534 Chara braunii
Cc01_g14290 Coffea canephora
CDE04G2145 Ceratophyllum demersum
CDE04G2770 Ceratophyllum demersum
Cfa011705 Carpinus fangiana
Ciclev10029073m.g Citrus clementina
CiPaw.13G076700 Carya illinoinensis
ClCG02G019520 Citrullus lanatus
COL.COLO4_19170 Corchorus olitorius
Cpa.g.sc112.8 Carica papaya
Cre09.g388282 Chlamydomonas reinhardtii
CsaV3_6G016190 Cucumis sativus L.
CSS0006724 Camellia sinensis var. sinensis
CSS0022052 Camellia sinensis var. sinensis
DCAR_002129 Daucus carota
DCAR_012499 Daucus carota
Dinv03105 Davidia involucrata
Dinv25093 Davidia involucrata
Dinv28648 Davidia involucrata
Duzib150G0854 Durio zibethinus
ECA247G1367 Erigeron canadensis
EL10Ac7g16180 Beta vulgaris
Eucgr.J01039 Eucalyptus grandis
FAN11G0587 Fragaria x ananassa
FAN16G2194 Fragaria x ananassa
FAN21G0630 Fragaria x ananassa
FAN25G2063 Fragaria x ananassa
FvH4_3g38720 Fragaria vesca
Glyma.05G235600 Glycine max
Gohir.A13G224200 Gossypium hirsutum
Gohir.D13G228900 Gossypium hirsutum
Gorai.013G259900 Gossypium raimondii
GSVIVG01024730001 Vitis vinifera
HanXRQChr16g0518331 Helianthus annuus
Haze_24336 Corylus avellana
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla
HPP92_002930 Vanilla planifolia
HPP92_028632 Vanilla planifolia
Hund09257 Selenicereus undatus
Lalb_Chr19g0128221 Lupinus albus
Lj3A585T46 Lonicera japonica
Lj4A493T9 Lonicera japonica
LjContig00155g0009730 Lotus japonicus
Lsat_1_v5_gn_9_20000 Lactuca sativa
Manes.10G106300 Manihot esculenta
Mapoly0046s0093 Marchantia polymorpha
MCO01G495 Micromonas commoda
MD03G1068600 Malus domestica
MD03G1068700 Malus domestica
MD11G1073200 Malus domestica
Medtr7g117410 Medicago truncatula
MELO3C025845.2 Cucumis melo
Migut.N03298 Erythranthe guttata
MSTRG.24154 Avicennia marina
Nitab4.5_0000037g0040 Nicotiana tabacum
Nn2g15825 Nelumbo nucifera
Oeu008301.1 Olea europaea
Os10g0500500 Oryza sativa ssp. japonica
Peaxi162Scf00384g00045 Petunia axillaris
PGR044G1475 Punica granatum
PGSC0003DMG400016288 Solanum tuberosum
PGSC0003DMG402011001 Solanum tuberosum
Phvul.001G033300 Phaseolus vulgaris
Potri.006G170500 Populus trichocarpa
Pp3c9_1670 Physcomitrium patens
Prupe.6G056500 Prunus persica
Psat3g002480 Pisum sativum
PSO339G4526 Papaver somniferum
PSO675G7356 Papaver somniferum
PSO801G0017 Papaver somniferum
QL01p038500 Quercus lobata
QL05p072708 Quercus lobata
RcHm_v2.0_Chr5g0069871 Rosa chinensis
Rhsim01G0236700 Rhododendron simsii
Sabra06G0131300 Salix brachista
SalBow6G3913 Salvia bowleyana
Sc21g0006380 Simmondsia chinensis
Sc21g0006400 Simmondsia chinensis
Sed0020527 Sechium edule
SEGI_13957 Sequoiadendron giganteum
SEGI_23907 Sequoiadendron giganteum
SGA_v2.0_scaffold25G11107 Striga asiatica
Solyc01g058530.4 Solanum lycopersicum
Solyc10g084700.2 Solanum lycopersicum
Sopen10g034140 Solanum pennellii
Sp1g05970 Schrenkiella parvula
Sp7g33090 Schrenkiella parvula
TAR369G0609 Trochodendron aralioides
TAR633G1775 Trochodendron aralioides
Thecc.09G300200 Theobroma cacao
Thhalv10008508m.g Eutrema salsugineum
TPR.G31524 Trifolium pratense
TPR.G37238 Trifolium pratense
TPR.G3936 Trifolium pratense
TPR.G4738 Trifolium pratense
TWI31G0765 Tripterygium wilfordii
unitig_26.g9973 Utricularia gibba
vmacro14595 Vaccinium macrocarpon
VMungo0647G0764 Vigna mungo
Zm00001eb012770 Zea mays
Zm00001eb142300 Zea mays

User provided reference genes

Program Settings