Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02950 Brassica napus
Aa31LG6G12710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1421 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.180 Anthoceros agrestis
Actinidia17396 Actinidia chinensis
Actinidia22932 Actinidia chinensis
Ah.11g045130 Amaranthus hybridus
AL7G15340 Arabidopsis lyrata
Aqoxy6G01899 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JJKM7S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SP2XL4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TNL2KY Arachis hypogaea
AT4G35760 Arabidopsis thaliana
ATR0661G434 Amborella trichopoda
Atru.chr3.926 Acer truncatum
AUR62029896 Chenopodium quinoa
AUR62033809 Chenopodium quinoa
BcaC01g00519 Brassica carinata
BcaNung05729 Brassica carinata
BolC1t00315H Brassica oleracea
BraA01t00278Z Brassica rapa
BraA08t34122Z Brassica rapa
C01p03300 Brassica napus
CAN.G890.19 Capsicum annuum
CANSAT25G2212 Cannabis sativa
CARHR244100 Cardamine hirsuta
Carub.0007s0449 Capsella rubella
Ca_24951_v3 Cicer arietinum L.
CBR_g79494 Chara braunii
Cc07_g11440 Coffea canephora
CDE03G0408 Ceratophyllum demersum
CDE06G1293 Ceratophyllum demersum
Cfa007040 Carpinus fangiana
Ciclev10025822m.g Citrus clementina
CiPaw.08G179600 Carya illinoinensis
ClCG01G020670 Citrullus lanatus
COL.COLO4_09868 Corchorus olitorius
Cpa.g.sc6.326 Carica papaya
Cre12.g493150 Chlamydomonas reinhardtii
CsaV3_6G047590 Cucumis sativus L.
CSS0031078 Camellia sinensis var. sinensis
DCAR_011589 Daucus carota
Dinv40154 Davidia involucrata
Duzib147G0472 Durio zibethinus
ECA238G3446 Erigeron canadensis
EL10Ac5g11470 Beta vulgaris
Eucgr.J02496 Eucalyptus grandis
FAN23G1227 Fragaria x ananassa
FAN26G2135 Fragaria x ananassa
FAN28G1872 Fragaria x ananassa
FvH4_1g10920 Fragaria vesca
Glyma.01G161400 Glycine max
Glyma.11G082400 Glycine max
Gohir.A02G175200 Gossypium hirsutum
Gohir.D03G004450 Gossypium hirsutum
Gohir.D03G004600 Gossypium hirsutum
Gorai.003G004900 Gossypium raimondii
GSVIVG01002335001 Vitis vinifera
HanXRQChr07g0192501 Helianthus annuus
HanXRQChr14g0442051 Helianthus annuus
Haze_03689 Corylus avellana
Hma1.2p1_4017F.1_g338140 Hydrangea macrophylla
HPP92_022166 Vanilla planifolia
Lalb_Chr05g0212091 Lupinus albus
Lj2A1074G31 Lonicera japonica
Lj2A487G56 Lonicera japonica
Lj2A933T26 Lonicera japonica
Lj2g0008610 Lotus japonicus
Lj2P933T24 Lonicera japonica
Lj4A227T48 Lonicera japonica
Lsat_1_v5_gn_2_75281 Lactuca sativa
Manes.01G152000 Manihot esculenta
Mapoly0023s0120 Marchantia polymorpha
MBI08_g40329_MAGBIO Magnolia biondii
MCO11G735 Micromonas commoda
MCO13G425 Micromonas commoda
MD02G1122300 Malus domestica
MD15G1236200 Malus domestica
MD15G1236500 Malus domestica
Medtr5g023180 Medicago truncatula
MELO3C007950.2 Cucumis melo
Migut.H02191 Erythranthe guttata
Migut.L00742 Erythranthe guttata
MSTRG.15589 Avicennia marina
MSTRG.2738 Avicennia marina
Nn6g31870 Nelumbo nucifera
Oeu012550.1 Olea europaea
Os03g0131500 Oryza sativa ssp. japonica
Peaxi162Scf00300g00017 Petunia axillaris
Peaxi162Scf56132g00003 Petunia axillaris
PGR102G2191 Punica granatum
PGSC0003DMG400001581 Solanum tuberosum
Phvul.002G112700 Phaseolus vulgaris
Potri.005G106500 Populus trichocarpa
Pp3c1_24560 Physcomitrium patens
Pp3c3_30980 Physcomitrium patens
PRCOL_00002964 Prasinoderma coloniale
PRCOL_00003732 Prasinoderma coloniale
Prupe.7G176300 Prunus persica
Psat2g151360 Pisum sativum
PSO541G6093 Papaver somniferum
PSO675G2300 Papaver somniferum
QL06p052316 Quercus lobata
RcHm_v2.0_Chr2g0098181 Rosa chinensis
RcHm_v2.0_Chr4g0418411 Rosa chinensis
RcHm_v2.0_Chr7g0224811 Rosa chinensis
Rhsim10G0204000 Rhododendron simsii
Sabra05G0087400 Salix brachista
SalBow3G0555 Salvia bowleyana
Sc07g0001240 Simmondsia chinensis
Sed0007504 Sechium edule
SEGI_06824 Sequoiadendron giganteum
SEGI_22324 Sequoiadendron giganteum
SEGI_31957 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30993 Striga asiatica
SGA_v2.0_scaffold132G34543 Striga asiatica
SGA_v2.0_scaffold132G34545 Striga asiatica
SMO119G0150 Selaginella moellendorffii
Solyc02g083270.4 Solanum lycopersicum
Sopen02g028060 Solanum pennellii
Sp7g33520 Schrenkiella parvula
TAR288G0001 Trochodendron aralioides
TAR625G0585 Trochodendron aralioides
THA.LOC104807519 Tarenaya hassleriana
Thecc.01G010100 Theobroma cacao
Thhalv10025477m.g Eutrema salsugineum
TPR.G25119 Trifolium pratense
TWI73G1263 Tripterygium wilfordii
unitig_88.g27769 Utricularia gibba
unitig_88.g27770 Utricularia gibba
vmacro20502 Vaccinium macrocarpon
VMungo1215G0927 Vigna mungo
Zm00001eb002560 Zea mays

User provided reference genes

Program Settings