Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG3G5420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1513 Anthoceros agrestis
Actinidia17287 Actinidia chinensis
Actinidia38594 Actinidia chinensis
Actinidia38597 Actinidia chinensis
AL3G23640 Arabidopsis lyrata
AL6G16750 Arabidopsis lyrata
Aqoxy7G00427 Aquilegia oxysepala
AT3G12030 Arabidopsis thaliana
AT5G06660 Arabidopsis thaliana
ATR0598G129 Amborella trichopoda
Atru.chr8.1156 Acer truncatum
AUR62012008 Chenopodium quinoa
AUR62015329 Chenopodium quinoa
AUR62043130 Chenopodium quinoa
BcaB04g21099 Brassica carinata
BcaC09g48209 Brassica carinata
BolC1t05270H Brassica oleracea
BraA01t04144Z Brassica rapa
CAN.G960.19 Capsicum annuum
CANSAT64G0849 Cannabis sativa
CARHR086590 Cardamine hirsuta
CARHR206550 Cardamine hirsuta
Carub.0003s1137 Capsella rubella
Carub.0006s0554 Capsella rubella
Ca_08246_v3 Cicer arietinum L.
CBR_g49549 Chara braunii
Cc06_g15530 Coffea canephora
CDE06G1328 Ceratophyllum demersum
Cfa020141 Carpinus fangiana
Ciclev10013918m.g Citrus clementina
CiPaw.09G028200 Carya illinoinensis
CiPaw.10G025100 Carya illinoinensis
ClCG10G017690 Citrullus lanatus
COL.COLO4_29362 Corchorus olitorius
Cpa.g.sc85.46 Carica papaya
Cre03.g182900 Chlamydomonas reinhardtii
CsaV3_3G038630 Cucumis sativus L.
CSS0007798 Camellia sinensis var. sinensis
CSS0024230 Camellia sinensis var. sinensis
CSS0031188 Camellia sinensis var. sinensis
CSS0042896 Camellia sinensis var. sinensis
DCAR_009688 Daucus carota
DCAR_019862 Daucus carota
Dinv16345 Davidia involucrata
Dinv24042 Davidia involucrata
Duzib106G1486 Durio zibethinus
ECA238G3575 Erigeron canadensis
EL10Ac3g06882 Beta vulgaris
FAN02G0902 Fragaria x ananassa
FAN05G0623 Fragaria x ananassa
FAN14G5103 Fragaria x ananassa
FvH4_6g21840 Fragaria vesca
Glyma.07G000600 Glycine max
Glyma.16G043900 Glycine max
Glyma.19G108300 Glycine max
Gohir.A09G128900 Gossypium hirsutum
Gohir.D09G124900 Gossypium hirsutum
Gorai.006G143800 Gossypium raimondii
GSVIVG01033465001 Vitis vinifera
HanXRQChr03g0075461 Helianthus annuus
HanXRQChr13g0398341 Helianthus annuus
HanXRQChr14g0438251 Helianthus annuus
Haze_20022 Corylus avellana
Haze_20025 Corylus avellana
Haze_26182 Corylus avellana
Hma1.2p1_0124F.1_g058350 Hydrangea macrophylla
HPP92_021275 Vanilla planifolia
Lalb_Chr14g0364291 Lupinus albus
Lalb_Chr22g0359441 Lupinus albus
Lj1g0011929 Lotus japonicus
Lj1P1133T16 Lonicera japonica
Lsat_1_v5_gn_2_56160 Lactuca sativa
Lsat_1_v5_gn_6_36581 Lactuca sativa
Manes.08G042400 Manihot esculenta
Manes.09G037701 Manihot esculenta
Mapoly0107s0023 Marchantia polymorpha
MD00G1019800 Malus domestica
MD03G1239200 Malus domestica
MD11G1118600 Malus domestica
MD12G1054500 Malus domestica
MD14G1053500 Malus domestica
Medtr7g085050 Medicago truncatula
MELO3C009607.2 Cucumis melo
Migut.J01866 Erythranthe guttata
MSTRG.19925 Avicennia marina
Nitab4.5_0000009g0230 Nicotiana tabacum
Nitab4.5_0009361g0020 Nicotiana tabacum
Oeu057587.1 Olea europaea
Os03g0721400 Oryza sativa ssp. japonica
Peaxi162Scf00463g00044 Petunia axillaris
PGR142G2565 Punica granatum
PGSC0003DMG400011451 Solanum tuberosum
Phvul.001G097100 Phaseolus vulgaris
Potri.016G060300 Populus trichocarpa
Pp3c21_11350 Physcomitrium patens
PRCOL_00005630 Prasinoderma coloniale
Prupe.7G082200 Prunus persica
Psat3g091080 Pisum sativum
PSO478G2464 Papaver somniferum
QL03p020127 Quercus lobata
QL07p006238 Quercus lobata
QL07p024560 Quercus lobata
RcHm_v2.0_Chr3g0479191 Rosa chinensis
Rhsim04G0093900 Rhododendron simsii
Rhsim04G0095300 Rhododendron simsii
Sabra16G0063200 Salix brachista
Sc13g0002410 Simmondsia chinensis
Sed0016712 Sechium edule
Sed0026900 Sechium edule
SEGI_08450 Sequoiadendron giganteum
SGA_v2.0_scaffold131G34402 Striga asiatica
SGA_v2.0_scaffold472G52090 Striga asiatica
SGA_v2.0_scaffold69G23042 Striga asiatica
SHI31753 Sapria himalayana
SMO367G0437 Selaginella moellendorffii
Solyc10g079000.1 Solanum lycopersicum
Sopen10g029620 Solanum pennellii
Sp3g10260 Schrenkiella parvula
Sp6g36210 Schrenkiella parvula
TAR369G0766 Trochodendron aralioides
TAR623G1561 Trochodendron aralioides
THA.LOC104799285 Tarenaya hassleriana
Thecc.05G175100 Theobroma cacao
Thhalv10016091m.g Eutrema salsugineum
Thhalv10022159m.g Eutrema salsugineum
TPR.G5912 Trifolium pratense
TWI77G0716 Tripterygium wilfordii
unitig_26.g10040 Utricularia gibba
vmacro22120 Vaccinium macrocarpon
VMungo1383G3424 Vigna mungo
Zm00001eb055560 Zea mays
Zm00001eb215980 Zea mays

User provided reference genes

Program Settings