Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p44550 Brassica napus
Aa31LG2G8670 Aethionema arabicum
Actinidia14921 Actinidia chinensis
Actinidia16683 Actinidia chinensis
Ah.03g138370 Amaranthus hybridus
AL5G10170 Arabidopsis lyrata
AL5G17030 Arabidopsis lyrata
Aqoxy3G04056 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IU6D7D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W577BF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XNS652 Arachis hypogaea
AT2G01220 Arabidopsis thaliana
AT3G27610 Arabidopsis thaliana
ATR0807G244 Amborella trichopoda
Atru.chr11.237 Acer truncatum
AUR62002812 Chenopodium quinoa
AUR62037268 Chenopodium quinoa
BcaC06g31323 Brassica carinata
BcaC06g34207 Brassica carinata
BolC7t43706H Brassica oleracea
BraA06t27329Z Brassica rapa
C07p31670 Brassica napus
CAN.G610.24 Capsicum annuum
CANSAT01G0643 Cannabis sativa
CARHR143760 Cardamine hirsuta
CARHR148990 Cardamine hirsuta
Carub.0005s0020 Capsella rubella
Carub.0005s0021 Capsella rubella
Carub.0005s0593 Capsella rubella
Carub.0005s0605 Capsella rubella
Ca_06889_v3 Cicer arietinum L.
CBR_g39317 Chara braunii
Cc11_g09670 Coffea canephora
CDE08G1136 Ceratophyllum demersum
Cfa015837 Carpinus fangiana
Ciclev10015519m.g Citrus clementina
CiPaw.05G241800 Carya illinoinensis
CiPaw.05G242600 Carya illinoinensis
ClCG01G005900 Citrullus lanatus
COL.COLO4_32148 Corchorus olitorius
Cpa.g.sc65.66 Carica papaya
Cre06.g278116 Chlamydomonas reinhardtii
CsaV3_5G028790 Cucumis sativus L.
CSS0033004 Camellia sinensis var. sinensis
DCAR_007264 Daucus carota
Dinv16136 Davidia involucrata
Dinv31596 Davidia involucrata
Duzib248G1493 Durio zibethinus
ECA246G0525 Erigeron canadensis
EL10Ac6g14305 Beta vulgaris
Eucgr.G02238 Eucalyptus grandis
FAN07G1481 Fragaria x ananassa
FAN12G0127 Fragaria x ananassa
FAN12G0185 Fragaria x ananassa
FAN17G2694 Fragaria x ananassa
FAN22G0620 Fragaria x ananassa
FvH4_4g26720 Fragaria vesca
Glyma.20G120600 Glycine max
Gohir.A03G148900 Gossypium hirsutum
Gohir.D02G171900 Gossypium hirsutum
Gohir.D12G121400 Gossypium hirsutum
Gorai.005G193400 Gossypium raimondii
Gorai.008G132300 Gossypium raimondii
GSVIVG01011843001 Vitis vinifera
HanXRQChr15g0477421 Helianthus annuus
Haze_00654 Corylus avellana
Hma1.2p1_1314F.1_g274990 Hydrangea macrophylla
Hma1.2p1_2306F.1_g319360 Hydrangea macrophylla
HPP92_024514 Vanilla planifolia
Hund20744 Selenicereus undatus
Lalb_Chr21g0308731 Lupinus albus
Lj5g0016761 Lotus japonicus
Lj6A753G52 Lonicera japonica
Lsat_1_v5_gn_3_62021 Lactuca sativa
Manes.06G064900 Manihot esculenta
Mapoly0100s0051 Marchantia polymorpha
MBI16_g44832_MAGBIO Magnolia biondii
MCO06G004 Micromonas commoda
MD16G1037200 Malus domestica
Medtr1g109590 Medicago truncatula
MELO3C005340.2 Cucumis melo
Migut.E00369 Erythranthe guttata
MSTRG.13555 Avicennia marina
Nitab4.5_0000694g0120 Nicotiana tabacum
Nitab4.5_0002112g0090 Nicotiana tabacum
Nn3g17949 Nelumbo nucifera
Nn4g23953 Nelumbo nucifera
Oeu027686.1 Olea europaea
Oeu027687.1 Olea europaea
Os01g0691500 Oryza sativa ssp. japonica
Peaxi162Scf00179g00534 Petunia axillaris
PGR119G2457 Punica granatum
PGSC0003DMG401030529 Solanum tuberosum
Phvul.007G032000 Phaseolus vulgaris
Potri.010G120200 Populus trichocarpa
Pp3c12_7340 Physcomitrium patens
Pp3c3_16750 Physcomitrium patens
PRCOL_00006609 Prasinoderma coloniale
Prupe.1G316800 Prunus persica
Psat6g224680 Pisum sativum
PSO063G1187 Papaver somniferum
PSO782G5715 Papaver somniferum
QL01p010815 Quercus lobata
QL93p0145_0024 Quercus lobata
RcHm_v2.0_Chr4g0434411 Rosa chinensis
Rhsim09G0103900 Rhododendron simsii
Sabra10G0090400 Salix brachista
SalBow8G0352 Salvia bowleyana
SalBow8G3248 Salvia bowleyana
Sc14g0007280 Simmondsia chinensis
Sed0017467 Sechium edule
SEGI_08541 Sequoiadendron giganteum
SEGI_29486 Sequoiadendron giganteum
SEGI_32432 Sequoiadendron giganteum
SGA_v2.0_scaffold14G06901 Striga asiatica
SGA_v2.0_scaffold14G06904 Striga asiatica
SMO163G0092 Selaginella moellendorffii
SMO196G0003 Selaginella moellendorffii
SMO265G0018 Selaginella moellendorffii
Solyc05g008870.3 Solanum lycopersicum
Sopen05g004630 Solanum pennellii
Sp2g12680 Schrenkiella parvula
TAR622G0977 Trochodendron aralioides
TAR622G1259 Trochodendron aralioides
THA.LOC104823950 Tarenaya hassleriana
Thecc.02G222000 Theobroma cacao
Thhalv10000909m.g Eutrema salsugineum
TPR.G4906 Trifolium pratense
TWI79G1572 Tripterygium wilfordii
unitig_699.g19483 Utricularia gibba
vmacro10599 Vaccinium macrocarpon
VMungo0720G1068 Vigna mungo
Zm00001eb360650 Zea mays

User provided reference genes

Program Settings