Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11320 Brassica napus
A08p10440 Brassica napus
Aa31LG2G14390 Aethionema arabicum
Aa31LG6G1970 Aethionema arabicum
Actinidia01244 Actinidia chinensis
AL1G45790 Arabidopsis lyrata
AL7G34790 Arabidopsis lyrata
Aqoxy2G03475 Aquilegia oxysepala
Aqoxy2G03476 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4G5U2W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.93DHY7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UI3LS8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VB8HUC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y9HS7A Arachis hypogaea
AT1G31720 Arabidopsis thaliana
AT4G19370 Arabidopsis thaliana
ATR0568G210 Amborella trichopoda
Atru.chr8.2614 Acer truncatum
BcaB04g18131 Brassica carinata
BcaC07g37737 Brassica carinata
BcaC09g51418 Brassica carinata
BcaNung01784 Brassica carinata
BolC1t01308H Brassica oleracea
BolC8t48118H Brassica oleracea
BraA01t01076Z Brassica rapa
BraA08t33042Z Brassica rapa
C01p13330 Brassica napus
CAN.G998.7 Capsicum annuum
CANSAT35G1964 Cannabis sativa
CARHR031020 Cardamine hirsuta
CARHR226160 Cardamine hirsuta
Carub.0001s3002 Capsella rubella
Carub.0007s2186 Capsella rubella
Cc08_g05990 Coffea canephora
CDE01G0013 Ceratophyllum demersum
Cfa012308 Carpinus fangiana
Ciclev10012886m.g Citrus clementina
CiPaw.11G074000 Carya illinoinensis
ClCG07G011130 Citrullus lanatus
ClCG11G016110 Citrullus lanatus
ClCG11G016120 Citrullus lanatus
COL.COLO4_16745 Corchorus olitorius
Cpa.g.c30909 Carica papaya
CsaV3_4G007120 Cucumis sativus L.
CSS0017808 Camellia sinensis var. sinensis
Dinv37434 Davidia involucrata
Duzib068G0478 Durio zibethinus
Duzib205G2043 Durio zibethinus
ECA233G3754 Erigeron canadensis
EL10Ac5g12591 Beta vulgaris
Eucgr.E01152 Eucalyptus grandis
FAN04G3107 Fragaria x ananassa
FAN08G1334 Fragaria x ananassa
FAN18G3850 Fragaria x ananassa
FvH4_5g24980 Fragaria vesca
Glyma.01G153000 Glycine max
Glyma.09G218300 Glycine max
Glyma.16G076400 Glycine max
Gohir.A08G148600 Gossypium hirsutum
Gohir.A12G201000 Gossypium hirsutum
Gohir.D08G169700 Gossypium hirsutum
Gohir.D12G203800 Gossypium hirsutum
Gorai.004G176900 Gossypium raimondii
Gorai.008G218600 Gossypium raimondii
GSVIVG01036890001 Vitis vinifera
HanXRQChr08g0233691 Helianthus annuus
Haze_08421 Corylus avellana
Haze_08422 Corylus avellana
Hund14310 Selenicereus undatus
Lalb_Chr05g0215181 Lupinus albus
Lalb_Chr09g0325061 Lupinus albus
Lalb_Chr16g0380441 Lupinus albus
Lj2g0019236 Lotus japonicus
Lj3A1053G42 Lonicera japonica
Lsat_1_v5_gn_6_17141 Lactuca sativa
Manes.15G184500 Manihot esculenta
Manes.17G003749 Manihot esculenta
MD06G1011300 Malus domestica
Medtr5g025640 Medicago truncatula
Medtr8g072220 Medicago truncatula
MELO3C016217.2 Cucumis melo
MELO3C032605.2 Cucumis melo
Migut.A00472 Erythranthe guttata
MSTRG.25750 Avicennia marina
Nitab4.5_0000943g0070 Nicotiana tabacum
Nitab4.5_0000986g0090 Nicotiana tabacum
Nitab4.5_0006244g0030 Nicotiana tabacum
Nitab4.5_0009213g0030 Nicotiana tabacum
Nn1g09337 Nelumbo nucifera
Nn3g19120 Nelumbo nucifera
Oeu046770.1 Olea europaea
Oeu047809.2 Olea europaea
Os02g0703300 Oryza sativa ssp. japonica
Peaxi162Scf00550g00429 Petunia axillaris
Peaxi162Scf00876g00429 Petunia axillaris
PGR031G0343 Punica granatum
PGR042G1103 Punica granatum
PGSC0003DMG400001952 Solanum tuberosum
Phvul.002G122500 Phaseolus vulgaris
Phvul.003G278300 Phaseolus vulgaris
Potri.004G235000 Populus trichocarpa
Prupe.5G013600 Prunus persica
Psat2g145040 Pisum sativum
Psat4g109120 Pisum sativum
PSO339G2078 Papaver somniferum
RcHm_v2.0_Chr7g0215261 Rosa chinensis
Rhsim11G0037900 Rhododendron simsii
Sabra01G0179700 Salix brachista
SalBow4G0438 Salvia bowleyana
SalBow8G0159 Salvia bowleyana
Sc07g0008040 Simmondsia chinensis
Sed0007709 Sechium edule
Sed0019955 Sechium edule
Sed0021253 Sechium edule
SGA_v2.0_scaffold121G33056 Striga asiatica
Solyc08g075290.2 Solanum lycopersicum
Sopen08g023890 Solanum pennellii
Sp1g27370 Schrenkiella parvula
Sp4g03880 Schrenkiella parvula
Sp7g17980 Schrenkiella parvula
TAR629G0350 Trochodendron aralioides
TAR636G1547 Trochodendron aralioides
THA.LOC104806200 Tarenaya hassleriana
THA.LOC104814387 Tarenaya hassleriana
Thecc.03G320600 Theobroma cacao
Thhalv10008873m.g Eutrema salsugineum
Thhalv10026210m.g Eutrema salsugineum
TPR.G8986 Trifolium pratense
TWI60G0533 Tripterygium wilfordii
unitig_37.g12906 Utricularia gibba
vmacro00100 Vaccinium macrocarpon
VMungo0251G3198 Vigna mungo
Zm00001eb251950 Zea mays

User provided reference genes

Program Settings