Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p34480 Brassica napus
Aa31LG11G2910 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3232 Anthoceros agrestis
Ah.06g188320 Amaranthus hybridus
Ah.06g188340 Amaranthus hybridus
Ah.06g188350 Amaranthus hybridus
Ah.06g188380 Amaranthus hybridus
Ah.14g088890 Amaranthus hybridus
AL6G34790 Arabidopsis lyrata
Aqoxy6G00049 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F86J4F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N289YY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TUTH4E Arachis hypogaea
AT5G23520 Arabidopsis thaliana
ATR1089G052 Amborella trichopoda
ATR1089G162 Amborella trichopoda
Atru.chr3.1412 Acer truncatum
Atru.chr3.1426 Acer truncatum
Atru.chr3.1427 Acer truncatum
AUR62000575 Chenopodium quinoa
AUR62006929 Chenopodium quinoa
BcaC02g09003 Brassica carinata
BcaNung03737 Brassica carinata
BcaNung03738 Brassica carinata
BcaNung03739 Brassica carinata
BcaNung03858 Brassica carinata
BolC7t44931H Brassica oleracea
BraA06t26376Z Brassica rapa
C07p44070 Brassica napus
CAN.G1921.10 Capsicum annuum
CANSAT54G0939 Cannabis sativa
CARHR190020 Cardamine hirsuta
Carub.0006s2129 Capsella rubella
Ca_08049_v3 Cicer arietinum L.
Ca_08055_v3 Cicer arietinum L.
Cc07_g19890 Coffea canephora
Cc07_g19900 Coffea canephora
CDE02G2172 Ceratophyllum demersum
Cfa020942 Carpinus fangiana
Ciclev10025459m.g Citrus clementina
CiPaw.15G186200 Carya illinoinensis
ClCG09G007860 Citrullus lanatus
COL.COLO4_12147 Corchorus olitorius
Cpa.g.sc127.35 Carica papaya
Cre06.g287176 Chlamydomonas reinhardtii
Cre07.g316450 Chlamydomonas reinhardtii
CsaV3_7G027210 Cucumis sativus L.
CsaV3_7G027220 Cucumis sativus L.
DCAR_019943 Daucus carota
Dinv17121 Davidia involucrata
Duzib187G1788 Durio zibethinus
ECA240G1768 Erigeron canadensis
EL10Ac4g09704 Beta vulgaris
EL10Ac8g19310 Beta vulgaris
Eucgr.H05059 Eucalyptus grandis
FAN19G0082 Fragaria x ananassa
FvH4_1g22090 Fragaria vesca
Glyma.09G244700 Glycine max
Glyma.18G248600 Glycine max
Gohir.A05G372800 Gossypium hirsutum
Gohir.D04G042700 Gossypium hirsutum
Gorai.012G048200 Gossypium raimondii
GSVIVG01000261001 Vitis vinifera
HanXRQChr04g0110551 Helianthus annuus
Haze_19376 Corylus avellana
Hma1.2p1_0213F.1_g090480 Hydrangea macrophylla
Hma1.2p1_0213F.1_g090490 Hydrangea macrophylla
HPP92_011426 Vanilla planifolia
HPP92_011427 Vanilla planifolia
HPP92_011435 Vanilla planifolia
Hund21772 Selenicereus undatus
Lalb_Chr19g0126361 Lupinus albus
Lalb_Chr20g0117801 Lupinus albus
Lalb_Chr20g0117861 Lupinus albus
Lj1g0015901 Lotus japonicus
Lj3g0014044 Lotus japonicus
Lj4A826T50 Lonicera japonica
Lsat_1_v5_gn_2_40320 Lactuca sativa
Manes.13G155500 Manihot esculenta
Manes.17G045200 Manihot esculenta
Mapoly0015s0082 Marchantia polymorpha
MBI03_g20878_MAGBIO Magnolia biondii
MD15G1334300 Malus domestica
Medtr6g034130 Medicago truncatula
Medtr6g034165 Medicago truncatula
Medtr7g081260 Medicago truncatula
MELO3C015720.2 Cucumis melo
Migut.H02558 Erythranthe guttata
MSTRG.23227 Avicennia marina
Nitab4.5_0000496g0260 Nicotiana tabacum
Nitab4.5_0010070g0020 Nicotiana tabacum
Nn5g27344 Nelumbo nucifera
Os04g0442100 Oryza sativa ssp. japonica
Peaxi162Scf00353g00730 Petunia axillaris
PGR102G2263 Punica granatum
PGSC0003DMG400023332 Solanum tuberosum
Phvul.008G048800 Phaseolus vulgaris
Potri.018G145524 Populus trichocarpa
Potri.T013000 Populus trichocarpa
Pp3c18_21070 Physcomitrium patens
Pp3c21_2450 Physcomitrium patens
Prupe.6G175200 Prunus persica
Psat3g100200 Pisum sativum
PSO017G4395 Papaver somniferum
PSO170G3497 Papaver somniferum
QL05p019434 Quercus lobata
QL09p028391 Quercus lobata
QL09p047332 Quercus lobata
QL09p047340 Quercus lobata
QL10p035062 Quercus lobata
RcHm_v2.0_Chr2g0116171 Rosa chinensis
Sabra19G0001400 Salix brachista
Sabra19G0011400 Salix brachista
SalBow8G4641 Salvia bowleyana
Sc09g0001990 Simmondsia chinensis
Sed0023505 Sechium edule
SEGI_40650 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06257 Striga asiatica
SHI08855 Sapria himalayana
SMO239G0053 Selaginella moellendorffii
Solyc05g056320.3 Solanum lycopersicum
Sopen05g034710 Solanum pennellii
Sp2g23680 Schrenkiella parvula
TAR628G0724 Trochodendron aralioides
THA.LOC104800580 Tarenaya hassleriana
Thecc.01G145000 Theobroma cacao
Thhalv10004341m.g Eutrema salsugineum
TPR.G29110 Trifolium pratense
TPR.G33754 Trifolium pratense
TWI75G0068 Tripterygium wilfordii
unitig_899.g14973 Utricularia gibba
vmacro12853 Vaccinium macrocarpon
VMungo1383G1950 Vigna mungo

User provided reference genes

Program Settings