Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p35680 Brassica napus
A08p00940 Brassica napus
Aa31LG10G930 Aethionema arabicum
Aa31LG8G920 Aethionema arabicum
Aa31sc158G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3620 Anthoceros agrestis
Actinidia21754 Actinidia chinensis
Actinidia32143 Actinidia chinensis
Ah.08g216180 Amaranthus hybridus
AL180U10010 Arabidopsis lyrata
AL1G63140 Arabidopsis lyrata
AL3G25790 Arabidopsis lyrata
Aqoxy7G04049 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.21ET8L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LV1MMJ Arachis hypogaea
AT1G55140 Arabidopsis thaliana
AT3G13740 Arabidopsis thaliana
ATR0661G556 Amborella trichopoda
Atru.chr1.3683 Acer truncatum
Atru.chr1.3684 Acer truncatum
Atru.chr1.3688 Acer truncatum
Atru.chr1.3690 Acer truncatum
AUR62009818 Chenopodium quinoa
AUR62038130 Chenopodium quinoa
BcaB04g16991 Brassica carinata
BcaB06g25441 Brassica carinata
BcaC01g01466 Brassica carinata
BcaNung06385 Brassica carinata
BolC3t21541H Brassica oleracea
BolC5t34074H Brassica oleracea
BraA05t22375Z Brassica rapa
BraA08t32149Z Brassica rapa
C03p92270 Brassica napus
C05p54090 Brassica napus
CAN.G1389.13 Capsicum annuum
CANSAT56G1468 Cannabis sativa
CARHR044740 Cardamine hirsuta
CARHR088470 Cardamine hirsuta
Carub.0001s4364 Capsella rubella
Carub.0003s1326 Capsella rubella
Ca_01193_v3 Cicer arietinum L.
CBR_g18726 Chara braunii
Cc07_g04610 Coffea canephora
CDE06G0040 Ceratophyllum demersum
Ciclev10026243m.g Citrus clementina
CiPaw.02G140600 Carya illinoinensis
ClCG07G013710 Citrullus lanatus
COL.COLO4_30653 Corchorus olitorius
Cpa.g.sc25.58 Carica papaya
CsaV3_3G043900 Cucumis sativus L.
CSS0014810 Camellia sinensis var. sinensis
CSS0024966 Camellia sinensis var. sinensis
CSS0026651 Camellia sinensis var. sinensis
DCAR_022713 Daucus carota
Dinv30384 Davidia involucrata
Duzib235G0974 Durio zibethinus
ECA234G0674 Erigeron canadensis
EL10Ac7g15769 Beta vulgaris
Eucgr.F03129 Eucalyptus grandis
FAN07G2466 Fragaria x ananassa
FAN12G1666 Fragaria x ananassa
FAN17G1021 Fragaria x ananassa
FvH4_4g12940 Fragaria vesca
Glyma.15G023700 Glycine max
Gohir.A10G060500 Gossypium hirsutum
Gohir.D10G061500 Gossypium hirsutum
Gorai.011G065700 Gossypium raimondii
GSVIVG01016848001 Vitis vinifera
HanXRQChr10g0310911 Helianthus annuus
Haze_15945 Corylus avellana
HPP92_003969 Vanilla planifolia
Hund18723 Selenicereus undatus
Lalb_Chr24g0396341 Lupinus albus
Lj3g0018823 Lotus japonicus
Lj5A45T77 Lonicera japonica
Lj9A518G85 Lonicera japonica
Lsat_1_v5_gn_5_134821 Lactuca sativa
Manes.04G139100 Manihot esculenta
Mapoly0003s0025 Marchantia polymorpha
MBI01_g01270_MAGBIO Magnolia biondii
MCO01G154 Micromonas commoda
MCO11G030 Micromonas commoda
MD09G1194100 Malus domestica
Medtr2g100220 Medicago truncatula
MELO3C013052.2 Cucumis melo
Migut.O00807 Erythranthe guttata
MSTRG.22589 Avicennia marina
Nitab4.5_0001295g0010 Nicotiana tabacum
Nitab4.5_0007429g0020 Nicotiana tabacum
Nn6g35465 Nelumbo nucifera
Nn8g38876 Nelumbo nucifera
Oeu039966.1 Olea europaea
Os05g0318300 Oryza sativa ssp. japonica
Os11g0237700 Oryza sativa ssp. japonica
Peaxi162Scf00038g01518 Petunia axillaris
PGR044G1952 Punica granatum
PGR044G2333 Punica granatum
PGSC0003DMG400002591 Solanum tuberosum
Phvul.005G160100 Phaseolus vulgaris
Potri.001G200300 Populus trichocarpa
Potri.003G038400 Populus trichocarpa
Pp3c14_13400 Physcomitrium patens
Prupe.3G050600 Prunus persica
Psat5g293640 Pisum sativum
PSO210G1067 Papaver somniferum
PSO210G2600 Papaver somniferum
QL05p012810 Quercus lobata
RcHm_v2.0_Chr6g0267021 Rosa chinensis
Rhsim08G0232900 Rhododendron simsii
Sabra01G0156900 Salix brachista
SalBow6G4349 Salvia bowleyana
Sc12g0010220 Simmondsia chinensis
Sed0023540 Sechium edule
SEGI_12033 Sequoiadendron giganteum
SGA_v2.0_scaffold45G16976 Striga asiatica
SGA_v2.0_scaffold71G23779 Striga asiatica
SMO134G0002 Selaginella moellendorffii
Solyc03g121530.3 Solanum lycopersicum
Sopen03g040340 Solanum pennellii
Sp1g40800 Schrenkiella parvula
Sp3g11940 Schrenkiella parvula
TAR383G0617 Trochodendron aralioides
TAR626G1971 Trochodendron aralioides
THA.LOC104810344 Tarenaya hassleriana
Thecc.06G110900 Theobroma cacao
Thhalv10011744m.g Eutrema salsugineum
Thhalv10021279m.g Eutrema salsugineum
TPR.G6604 Trifolium pratense
TWI31G1228 Tripterygium wilfordii
unitig_0.g2872 Utricularia gibba
vmacro18789 Vaccinium macrocarpon
VMungo1080G0888 Vigna mungo
Zm00001eb120860 Zea mays

User provided reference genes

Program Settings