Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p19990 Brassica napus
A09p51850 Brassica napus
Aa31LG9G16250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2832 Anthoceros agrestis
AL5G26920 Arabidopsis lyrata
Aqoxy7G00859 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7A7AL1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.STP4KF Arachis hypogaea
AT3G47630 Arabidopsis thaliana
ATR0605G282 Amborella trichopoda
Atru.chr10.296 Acer truncatum
AUR62032162 Chenopodium quinoa
AUR62036920 Chenopodium quinoa
BcaB01g00896 Brassica carinata
BcaC01g01793 Brassica carinata
BcaC07g40489 Brassica carinata
BolC3t19474H Brassica oleracea
BolC8t51059H Brassica oleracea
BraA06t25085Z Brassica rapa
BraA09t40620Z Brassica rapa
C03p71840 Brassica napus
C08p34580 Brassica napus
CAN.G508.15 Capsicum annuum
CAN.G809.52 Capsicum annuum
CANSAT35G1866 Cannabis sativa
CARHR106840 Cardamine hirsuta
CARHR156310 Cardamine hirsuta
Carub.0005s1376 Capsella rubella
Ca_18231_v3 Cicer arietinum L.
CBR_g8146 Chara braunii
Cc00_g27340 Coffea canephora
Cc09_g05110 Coffea canephora
CDE06G1059 Ceratophyllum demersum
Cfa024540 Carpinus fangiana
Ciclev10016117m.g Citrus clementina
CiPaw.09G138500 Carya illinoinensis
ClCG01G025750 Citrullus lanatus
COL.COLO4_05791 Corchorus olitorius
COL.COLO4_05792 Corchorus olitorius
Cpa.g.sc30.99 Carica papaya
Cre10.g436900 Chlamydomonas reinhardtii
CsaV3_6G052990 Cucumis sativus L.
CSS0034787 Camellia sinensis var. sinensis
DCAR_003756 Daucus carota
Dinv01020 Davidia involucrata
Dinv07001 Davidia involucrata
Dinv26323 Davidia involucrata
Duzib052G0373 Durio zibethinus
ECA247G0018 Erigeron canadensis
EL10Ac5g11217 Beta vulgaris
Eucgr.A00192 Eucalyptus grandis
FAN11G1857 Fragaria x ananassa
FAN16G3015 Fragaria x ananassa
FAN21G0687 Fragaria x ananassa
FAN25G2454 Fragaria x ananassa
FvH4_3g13050 Fragaria vesca
Glyma.05G134300 Glycine max
Glyma.08G089000 Glycine max
Glyma.08G193350 Glycine max
Gohir.A11G047300 Gossypium hirsutum
Gohir.D11G050900 Gossypium hirsutum
Gohir.D11G050975 Gossypium hirsutum
Gorai.007G055300 Gossypium raimondii
GSVIVG01012154001 Vitis vinifera
HanXRQChr12g0369311 Helianthus annuus
Haze_05249 Corylus avellana
Haze_05254 Corylus avellana
Hma1.2p1_0088F.1_g045273 Hydrangea macrophylla
Hma1.2p1_0088F.1_g045276 Hydrangea macrophylla
Hma1.2p1_1011F.1_g247520 Hydrangea macrophylla
HPP92_021274 Vanilla planifolia
Hund09980 Selenicereus undatus
Lalb_Chr07g0188221 Lupinus albus
Lalb_Chr07g0188231 Lupinus albus
Lj1C1150G3 Lonicera japonica
Lj4g0014401 Lotus japonicus
Lsat_1_v5_gn_1_24420 Lactuca sativa
Manes.03G070940 Manihot esculenta
Mapoly0019s0171 Marchantia polymorpha
MCO11G061 Micromonas commoda
MD05G1245400 Malus domestica
Medtr4g094760 Medicago truncatula
MELO3C007010.2 Cucumis melo
Migut.G01043 Erythranthe guttata
Migut.M02015 Erythranthe guttata
Migut.O00470 Erythranthe guttata
Nitab4.5_0000844g0290 Nicotiana tabacum
Nitab4.5_0010610g0030 Nicotiana tabacum
Nn7g38356 Nelumbo nucifera
Oeu056062.1 Olea europaea
Os05g0295700 Oryza sativa ssp. japonica
Os11g0549650 Oryza sativa ssp. japonica
Os11g0549690 Oryza sativa ssp. japonica
Peaxi162Scf00036g02217 Petunia axillaris
PGR044G2521 Punica granatum
PGSC0003DMG400007316 Solanum tuberosum
Phvul.002G188100 Phaseolus vulgaris
Potri.001G076200 Populus trichocarpa
Pp3c7_4190 Physcomitrium patens
PRCOL_00001260 Prasinoderma coloniale
Prupe.4G118500 Prunus persica
Prupe.7G025500 Prunus persica
Psat7g087640 Pisum sativum
PSO675G2002 Papaver somniferum
PSO675G2427 Papaver somniferum
QL11p012010 Quercus lobata
RcHm_v2.0_Chr5g0021241 Rosa chinensis
Rhsim05G0003000 Rhododendron simsii
Rhsim07G0106900 Rhododendron simsii
Rhsim13G0219000 Rhododendron simsii
Sabra01G0053000 Salix brachista
Sc04g0004120 Simmondsia chinensis
Sc04g0004130 Simmondsia chinensis
Sed0025041 Sechium edule
SEGI_28167 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12765 Striga asiatica
SHI32710 Sapria himalayana
SHI32711 Sapria himalayana
SMO367G0859 Selaginella moellendorffii
Solyc02g081840.4 Solanum lycopersicum
Sopen02g026460 Solanum pennellii
Sp1g31680 Schrenkiella parvula
TAR624G0428 Trochodendron aralioides
THA.LOC104812245 Tarenaya hassleriana
THA.LOC104824626 Tarenaya hassleriana
Thecc.02G003100 Theobroma cacao
Thhalv10011094m.g Eutrema salsugineum
TPR.G23817 Trifolium pratense
TWI63G1157 Tripterygium wilfordii
unitig_46.g18341 Utricularia gibba
vmacro03560 Vaccinium macrocarpon
VMungo0251G1440 Vigna mungo
Zm00001eb201720 Zea mays

User provided reference genes

Program Settings