Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p13450 Brassica napus
A07p33100 Brassica napus
Aa31LG2G2820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.787 Anthoceros agrestis
Actinidia35717 Actinidia chinensis
Ah.10g034300 Amaranthus hybridus
AL2G23690 Arabidopsis lyrata
Aqoxy3G04009 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.00Q11I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YJU2T0 Arachis hypogaea
AT1G66080 Arabidopsis thaliana
ATR0598G055 Amborella trichopoda
Atru.chr1.1947 Acer truncatum
AUR62009143 Chenopodium quinoa
AUR62039116 Chenopodium quinoa
BcaB03g15295 Brassica carinata
BcaB05g24153 Brassica carinata
BcaC03g14730 Brassica carinata
BcaC08g46080 Brassica carinata
BolC2t08309H Brassica oleracea
BolC6t39030H Brassica oleracea
BraA02t06403Z Brassica rapa
BraA07t30938Z Brassica rapa
C02p21750 Brassica napus
C06p39370 Brassica napus
CAN.G1464.8 Capsicum annuum
CANSAT80G0886 Cannabis sativa
CARHR058040 Cardamine hirsuta
Carub.0002s1207 Capsella rubella
Ca_05775_v3 Cicer arietinum L.
CBR_g54207 Chara braunii
CBR_g54208 Chara braunii
Cc07_g13000 Coffea canephora
CDE05G1035 Ceratophyllum demersum
CDE05G2622 Ceratophyllum demersum
Cfa007771 Carpinus fangiana
Ciclev10005984m.g Citrus clementina
CiPaw.03G078000 Carya illinoinensis
ClCG05G012140 Citrullus lanatus
COL.COLO4_08161 Corchorus olitorius
Cpa.g.sc178.4 Carica papaya
Cre16.g691215 Chlamydomonas reinhardtii
CsaV3_3G020300 Cucumis sativus L.
CSS0022144 Camellia sinensis var. sinensis
CSS0023311 Camellia sinensis var. sinensis
CSS0046217 Camellia sinensis var. sinensis
DCAR_010066 Daucus carota
Dinv28227 Davidia involucrata
Duzib187G0521 Durio zibethinus
Duzib264G0381 Durio zibethinus
ECA240G4510 Erigeron canadensis
EL10Ac2g03874 Beta vulgaris
FAN19G0020 Fragaria x ananassa
FAN26G1601 Fragaria x ananassa
FAN28G1805 Fragaria x ananassa
FvH4_1g28840 Fragaria vesca
Glyma.02G242000 Glycine max
Glyma.14G211800 Glycine max
Gohir.A12G002700 Gossypium hirsutum
Gohir.D12G002400 Gossypium hirsutum
Gorai.008G001800 Gossypium raimondii
GSVIVG01026316001 Vitis vinifera
HanXRQChr09g0259821 Helianthus annuus
Haze_14303 Corylus avellana
Hma1.2p1_0158F.1_g069840 Hydrangea macrophylla
HPP92_002287 Vanilla planifolia
Hund03335 Selenicereus undatus
Lalb_Chr10g0104081 Lupinus albus
Lalb_Chr17g0345911 Lupinus albus
Lj2A514T43 Lonicera japonica
LjContig00141g0001362 Lotus japonicus
Lsat_1_v5_gn_8_111480 Lactuca sativa
Manes.05G062600 Manihot esculenta
Mapoly0001s0397 Marchantia polymorpha
Mapoly0006s0187 Marchantia polymorpha
MBI13_g21692_MAGBIO Magnolia biondii
MCO11G231 Micromonas commoda
MD01G1041600 Malus domestica
MD03G1052600 Malus domestica
MD09G1263000 Malus domestica
MD16G1261800 Malus domestica
MD17G1258000 Malus domestica
Medtr5g077260 Medicago truncatula
MELO3C023753.2 Cucumis melo
Migut.K01111 Erythranthe guttata
MSTRG.15644 Avicennia marina
MSTRG.3687 Avicennia marina
Nitab4.5_0000905g0130 Nicotiana tabacum
Nitab4.5_0017196g0010 Nicotiana tabacum
Nn3g18467 Nelumbo nucifera
Oeu009432.1 Olea europaea
Oeu048966.1 Olea europaea
Os03g0237500 Oryza sativa ssp. japonica
Peaxi162Scf00525g00623 Petunia axillaris
PGR031G2550 Punica granatum
PGSC0003DMG400023318 Solanum tuberosum
Phvul.008G239100 Phaseolus vulgaris
Potri.004G082100 Populus trichocarpa
Pp3c10_12120 Physcomitrium patens
Pp3c16_2230 Physcomitrium patens
Pp3c27_3020 Physcomitrium patens
Pp3c3_23430 Physcomitrium patens
PRCOL_00005463 Prasinoderma coloniale
Prupe.3G160700 Prunus persica
Psat2g044640 Pisum sativum
PSO063G5475 Papaver somniferum
PSO782G1752 Papaver somniferum
QL02p060024 Quercus lobata
RcHm_v2.0_Chr3g0493321 Rosa chinensis
Rhsim08G0020200 Rhododendron simsii
Sabra04G0054600 Salix brachista
SalBow5G2060 Salvia bowleyana
Sc09g0004530 Simmondsia chinensis
Sed0000187 Sechium edule
Sed0027099 Sechium edule
SGA_v2.0_scaffold45G17133 Striga asiatica
SMO278G0026 Selaginella moellendorffii
SMO367G0342 Selaginella moellendorffii
Solyc05g056560.3 Solanum lycopersicum
Sopen05g034960 Solanum pennellii
Sp5g21150 Schrenkiella parvula
TAR371G0118 Trochodendron aralioides
TAR629G3091 Trochodendron aralioides
THA.LOC104822070 Tarenaya hassleriana
Thecc.01G244600 Theobroma cacao
Thhalv10019182m.g Eutrema salsugineum
TPR.G9985 Trifolium pratense
TWI53G1594 Tripterygium wilfordii
TWI74G1040 Tripterygium wilfordii
unitig_748.g7250 Utricularia gibba
vmacro18518 Vaccinium macrocarpon
VMungo0647G1816 Vigna mungo
Zm00001eb010060 Zea mays

User provided reference genes

Program Settings