Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p43400 Brassica napus
Aa31LG1G17260 Aethionema arabicum
AL8G42100 Arabidopsis lyrata
Aqoxy2G04193 Aquilegia oxysepala
Aqoxy4G00002 Aquilegia oxysepala
Aqoxy4G02969 Aquilegia oxysepala
Aqoxy4G03322 Aquilegia oxysepala
Aqoxy83s001 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea
AT5G64680 Arabidopsis thaliana
ATR0582G041 Amborella trichopoda
Atru.chr12.1335 Acer truncatum
Atru.chr12.1436 Acer truncatum
AUR62006518 Chenopodium quinoa
AUR62025013 Chenopodium quinoa
BcaB04g19984 Brassica carinata
BcaB07g29751 Brassica carinata
BcaC01g02700 Brassica carinata
BcaC03g18270 Brassica carinata
BcaC08g46818 Brassica carinata
BolC2t12415H Brassica oleracea
BolC3t18409H Brassica oleracea
BolC6t39862H Brassica oleracea
BraA02t09265Z Brassica rapa
C02p63500 Brassica napus
C03p61480 Brassica napus
CANSAT80G1771 Cannabis sativa
CANSAT80G1963 Cannabis sativa
CARHR278660 Cardamine hirsuta
Carub.0008s2548 Capsella rubella
Ca_13888_v3 Cicer arietinum L.
Ca_13890_v3 Cicer arietinum L.
Ca_23210_v3 Cicer arietinum L.
Cc00_g31860 Coffea canephora
Cc04_g15860 Coffea canephora
Cc04_g15880 Coffea canephora
CDE09G0879 Ceratophyllum demersum
Cfa010215 Carpinus fangiana
Cfa011664 Carpinus fangiana
Ciclev10005823m.g Citrus clementina
CiPaw.03G184600 Carya illinoinensis
CiPaw.05G100400 Carya illinoinensis
ClCG11G017800 Citrullus lanatus
COL.COLO4_27171 Corchorus olitorius
Cpa.g.sc36.199 Carica papaya
CsaV3_4G033440 Cucumis sativus L.
CSS0005312 Camellia sinensis var. sinensis
CSS0033783 Camellia sinensis var. sinensis
DCAR_030841 Daucus carota
Dinv16498 Davidia involucrata
Dinv35828 Davidia involucrata
Duzib052G0736 Durio zibethinus
ECA238G4295 Erigeron canadensis
EL10Ac1g01696 Beta vulgaris
Eucgr.B02910 Eucalyptus grandis
Eucgr.E01503 Eucalyptus grandis
FAN07G0479 Fragaria x ananassa
FAN12G4206 Fragaria x ananassa
FAN17G1441 Fragaria x ananassa
FvH4_4g22530 Fragaria vesca
Glyma.07G200400 Glycine max
Glyma.13G175800 Glycine max
Gohir.A01G020300 Gossypium hirsutum
Gohir.D01G018900 Gossypium hirsutum
Gorai.002G021100 Gossypium raimondii
GSVIVG01001102001 Vitis vinifera
Haze_23070 Corylus avellana
Haze_24259 Corylus avellana
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla
HPP92_000268 Vanilla planifolia
Hund20854 Selenicereus undatus
Lalb_Chr15g0079851 Lupinus albus
Lj3g0021746 Lotus japonicus
Lj6g0004130 Lotus japonicus
Lsat_1_v5_gn_2_95001 Lactuca sativa
Manes.08G100300 Manihot esculenta
MBI11_g07033_MAGBIO Magnolia biondii
MD13G1131700 Malus domestica
MD16G1142000 Malus domestica
Medtr8g012410 Medicago truncatula
MELO3C032361.2 Cucumis melo
Migut.C00405 Erythranthe guttata
Migut.C01115 Erythranthe guttata
MSTRG.22403 Avicennia marina
Nitab4.5_0000059g0460 Nicotiana tabacum
Nitab4.5_0000191g0220 Nicotiana tabacum
Nn3g20876 Nelumbo nucifera
Oeu001539.2 Olea europaea
Oeu055297.1 Olea europaea
Os01g0259900 Oryza sativa ssp. japonica
Os08g0422600 Oryza sativa ssp. japonica
Peaxi162Scf00079g01513 Petunia axillaris
Peaxi162Scf00698g00117 Petunia axillaris
PGR102G3094 Punica granatum
PGSC0003DMG400008953 Solanum tuberosum
PGSC0003DMG400022718 Solanum tuberosum
Phvul.002G231200 Phaseolus vulgaris
Potri.001G068500 Populus trichocarpa
Prupe.1G213900 Prunus persica
Psat4g204640 Pisum sativum
PSO017G3279 Papaver somniferum
PSO170G6181 Papaver somniferum
QL03p048972 Quercus lobata
RcHm_v2.0_Chr4g0428761 Rosa chinensis
Rhsim12G0016500 Rhododendron simsii
Sabra01G0047700 Salix brachista
SalBow2G0170 Salvia bowleyana
Sc06g0007790 Simmondsia chinensis
Sed0015511 Sechium edule
SEGI_10970 Sequoiadendron giganteum
SGA_v2.0_scaffold154G37193 Striga asiatica
SGA_v2.0_scaffold28G11983 Striga asiatica
Solyc01g008760.4 Solanum lycopersicum
Solyc09g009850.4 Solanum lycopersicum
Sopen01g004270 Solanum pennellii
Sopen09g004610 Solanum pennellii
Sp2g27740 Schrenkiella parvula
TAR371G1010 Trochodendron aralioides
TAR371G1211 Trochodendron aralioides
TAR629G1598 Trochodendron aralioides
THA.LOC104799437 Tarenaya hassleriana
Thecc.02G191100 Theobroma cacao
Thhalv10004934m.g Eutrema salsugineum
TPR.G16445 Trifolium pratense
TWI18G0365 Tripterygium wilfordii
TWI36G0396 Tripterygium wilfordii
unitig_747.g21266 Utricularia gibba
vmacro01013 Vaccinium macrocarpon
vmacro15379 Vaccinium macrocarpon
VMungo0251G3272 Vigna mungo
VMungo0331G1117 Vigna mungo
Zm00001eb127900 Zea mays

User provided reference genes

Program Settings