Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p42830 Brassica napus
Aa31LG4G7300 Aethionema arabicum
Actinidia29492 Actinidia chinensis
Ah.05g169090 Amaranthus hybridus
AL2G37490 Arabidopsis lyrata
Aqoxy6G00307 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.74JCE2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E0932D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XM429X Arachis hypogaea
AT1G77290 Arabidopsis thaliana
ATR0584G218 Amborella trichopoda
Atru.chr13.1575 Acer truncatum
AUR62007708 Chenopodium quinoa
AUR62013433 Chenopodium quinoa
BcaC08g47621 Brassica carinata
BolC6t40163H Brassica oleracea
BraA07t31804Z Brassica rapa
C06p51450 Brassica napus
CAN.G531.17 Capsicum annuum
CAN.G716.15 Capsicum annuum
CAN.G749.9 Capsicum annuum
CANSAT25G1205 Cannabis sativa
CARHR070790 Cardamine hirsuta
CARHR070800 Cardamine hirsuta
Carub.0002s2417 Capsella rubella
Ca_16611_v3 Cicer arietinum L.
Cc10_g13730 Coffea canephora
Ciclev10002166m.g Citrus clementina
CiPaw.15G031100 Carya illinoinensis
ClCG11G016010 Citrullus lanatus
COL.COLO4_35486 Corchorus olitorius
Cpa.g.sc26.314 Carica papaya
CsaV3_4G028000 Cucumis sativus L.
CSS0002345 Camellia sinensis var. sinensis
CSS0024013 Camellia sinensis var. sinensis
CSS0035583 Camellia sinensis var. sinensis
DCAR_014367 Daucus carota
Dinv14694 Davidia involucrata
Dinv27268 Davidia involucrata
Duzib041G0058 Durio zibethinus
ECA236G4352 Erigeron canadensis
EL10Ac1g01360 Beta vulgaris
Eucgr.A01942 Eucalyptus grandis
Eucgr.B02072 Eucalyptus grandis
Eucgr.C00041 Eucalyptus grandis
Eucgr.E01005 Eucalyptus grandis
Eucgr.H02194 Eucalyptus grandis
Eucgr.H02561 Eucalyptus grandis
Eucgr.J01273 Eucalyptus grandis
FAN15G2418 Fragaria x ananassa
FAN15G2964 Fragaria x ananassa
FAN20G2399 Fragaria x ananassa
FAN24G0310 Fragaria x ananassa
FvH4_2g27900 Fragaria vesca
Glyma.06G117800 Glycine max
Glyma.13G034200 Glycine max
Glyma.14G155200 Glycine max
Gohir.A02G110700 Gossypium hirsutum
Gohir.D03G069006 Gossypium hirsutum
Gorai.013G108000 Gossypium raimondii
GSVIVG01008804001 Vitis vinifera
HanXRQChr02g0045111 Helianthus annuus
Haze_17639 Corylus avellana
Hma1.2p1_1121F.1_g259260 Hydrangea macrophylla
HPP92_005662 Vanilla planifolia
Lalb_Chr08g0241041 Lupinus albus
Lalb_Chr11g0066191 Lupinus albus
Lj1g0001609 Lotus japonicus
Lj4C681T5 Lonicera japonica
Lj4C682T8 Lonicera japonica
Lsat_1_v5_gn_1_7480 Lactuca sativa
Manes.02G168700 Manihot esculenta
Mapoly0004s0061 Marchantia polymorpha
Mapoly0029s0068 Marchantia polymorpha
MBI06_g35214_MAGBIO Magnolia biondii
MD08G1159700 Malus domestica
MD15G1133600 Malus domestica
Medtr3g088635 Medicago truncatula
MELO3C010516.2 Cucumis melo
Migut.C01068 Erythranthe guttata
MSTRG.1410 Avicennia marina
Nitab4.5_0000317g0210 Nicotiana tabacum
Nitab4.5_0003978g0050 Nicotiana tabacum
Nn1g08950 Nelumbo nucifera
Nn5g28442 Nelumbo nucifera
Oeu026373.1 Olea europaea
Os04g0435500 Oryza sativa ssp. japonica
Peaxi162Scf00066g00224 Petunia axillaris
Peaxi162Scf00190g01526 Petunia axillaris
Peaxi162Scf00591g00717 Petunia axillaris
Peaxi162Scf00591g00718 Petunia axillaris
PGR044G1855 Punica granatum
PGSC0003DMG400025321 Solanum tuberosum
Phvul.001G068100 Phaseolus vulgaris
Phvul.009G130200 Phaseolus vulgaris
Potri.005G182000 Populus trichocarpa
Pp3c14_19170 Physcomitrium patens
Pp3c17_19050 Physcomitrium patens
Pp3c17_19052 Physcomitrium patens
Pp3c2_9920 Physcomitrium patens
Pp3c4_7330 Physcomitrium patens
Pp3c7_4180 Physcomitrium patens
Prupe.1G489200 Prunus persica
Psat5g084560 Pisum sativum
PSO170G0207 Papaver somniferum
PSO528G0126 Papaver somniferum
QL09p032362 Quercus lobata
RcHm_v2.0_Chr6g0296751 Rosa chinensis
RcHm_v2.0_Chr7g0218491 Rosa chinensis
Rhsim07G0179900 Rhododendron simsii
Sabra05G0138000 Salix brachista
Sc26g0002800 Simmondsia chinensis
Sed0026006 Sechium edule
SEGI_14681 Sequoiadendron giganteum
SEGI_24309 Sequoiadendron giganteum
SEGI_40355 Sequoiadendron giganteum
SGA_v2.0_scaffold52G18918 Striga asiatica
SMO116G0017 Selaginella moellendorffii
Solyc04g057890.3 Solanum lycopersicum
Sopen04g025740 Solanum pennellii
Sp5g32460 Schrenkiella parvula
TAR381G0459 Trochodendron aralioides
THA.LOC104812081 Tarenaya hassleriana
Thecc.08G133400 Theobroma cacao
Thhalv10019613m.g Eutrema salsugineum
TPR.G21851 Trifolium pratense
TWI34G0248 Tripterygium wilfordii
unitig_0.g2114 Utricularia gibba
vmacro20860 Vaccinium macrocarpon
VMungo0251G2592 Vigna mungo
VMungo0647G2141 Vigna mungo
VMungo1309G0075 Vigna mungo
Zm00001eb082540 Zea mays

User provided reference genes

Program Settings