Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p00720 Brassica napus
Aa31LG1G10550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2264 Anthoceros agrestis
Actinidia20275 Actinidia chinensis
Ah.05g179110 Amaranthus hybridus
Ah.07g207870 Amaranthus hybridus
AL1G11320 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.FN9JYV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IJN1JI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UMNZ42 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YB3WUJ Arachis hypogaea
AT1G01180 Arabidopsis thaliana
ATR0090G035 Amborella trichopoda
Atru.chr5.746 Acer truncatum
AUR62004546 Chenopodium quinoa
AUR62022660 Chenopodium quinoa
BcaB03g13563 Brassica carinata
BolC5t28860H Brassica oleracea
BraA10t42349Z Brassica rapa
C05p00760 Brassica napus
CAN.G1045.39 Capsicum annuum
CARHR001290 Cardamine hirsuta
Carub.0001s0103 Capsella rubella
Ca_23494_v3 Cicer arietinum L.
Ca_29944_v3 Cicer arietinum L.
Cc02_g39840 Coffea canephora
Cfa003752 Carpinus fangiana
Ciclev10023878m.g Citrus clementina
CiPaw.01G080700 Carya illinoinensis
ClCG06G002760 Citrullus lanatus
COL.COLO4_06220 Corchorus olitorius
Cpa.g.sc141.18 Carica papaya
CsaV3_6G008930 Cucumis sativus L.
Dinv32633 Davidia involucrata
Duzib133G0870 Durio zibethinus
Duzib138G0081 Durio zibethinus
ECA234G4535 Erigeron canadensis
EL10Ac1g00202 Beta vulgaris
EL10Ac5g10561 Beta vulgaris
FAN01G2899 Fragaria x ananassa
FAN03G0327 Fragaria x ananassa
FAN06G1719 Fragaria x ananassa
FAN06G4171 Fragaria x ananassa
FAN10G2153 Fragaria x ananassa
FAN10G4192 Fragaria x ananassa
Glyma.07G051400 Glycine max
Gohir.A07G134700 Gossypium hirsutum
Gohir.A12G115600 Gossypium hirsutum
Gohir.D07G139300 Gossypium hirsutum
Gohir.D12G119200 Gossypium hirsutum
Gorai.001G151400 Gossypium raimondii
Gorai.008G129200 Gossypium raimondii
HanXRQChr16g0524851 Helianthus annuus
HanXRQChr17g0563091 Helianthus annuus
Haze_15704 Corylus avellana
Haze_15705 Corylus avellana
Haze_15713 Corylus avellana
Hma1.2p1_0309F.1_g120580 Hydrangea macrophylla
Lalb_Chr17g0342931 Lupinus albus
Lj2g0016031 Lotus japonicus
Lj3g0011008 Lotus japonicus
Lj9P603T40 Lonicera japonica
Lsat_1_v5_gn_4_31960 Lactuca sativa
Lsat_1_v5_gn_4_31980 Lactuca sativa
Manes.01G241500 Manihot esculenta
Mapoly0044s0088 Marchantia polymorpha
MBI04_g22377_MAGBIO Magnolia biondii
MBI04_g25320_MAGBIO Magnolia biondii
MD07G1156900 Malus domestica
Medtr8g024680 Medicago truncatula
MELO3C022251.2 Cucumis melo
Migut.B01913 Erythranthe guttata
MSTRG.20916 Avicennia marina
MSTRG.20917 Avicennia marina
MSTRG.26254 Avicennia marina
Nitab4.5_0000307g0270 Nicotiana tabacum
Nn3g18834 Nelumbo nucifera
Oeu022737.1 Olea europaea
Oeu042964.1 Olea europaea
Os09g0518900 Oryza sativa ssp. japonica
Peaxi162Scf00767g00044 Petunia axillaris
PGSC0003DMG400018381 Solanum tuberosum
Phvul.010G118000 Phaseolus vulgaris
Potri.002G177500 Populus trichocarpa
Potri.014G103800 Populus trichocarpa
Pp3c20_5150 Physcomitrium patens
Pp3c23_20890 Physcomitrium patens
Prupe.2G195400 Prunus persica
Psat4g216640 Pisum sativum
PSO063G1123 Papaver somniferum
PSO782G1789 Papaver somniferum
QL08p046701 Quercus lobata
QL08p046715 Quercus lobata
RcHm_v2.0_Chr1g0360821 Rosa chinensis
RcHm_v2.0_Chr1g0360831 Rosa chinensis
Rhsim07G0001000 Rhododendron simsii
Sabra02G0136100 Salix brachista
SalBow3G0292 Salvia bowleyana
SalBow3G4666 Salvia bowleyana
SalBow6G4791 Salvia bowleyana
Sc01g0000420 Simmondsia chinensis
Sc01g0002310 Simmondsia chinensis
Sc01g0002320 Simmondsia chinensis
Sc17g0001460 Simmondsia chinensis
Sc22g0003370 Simmondsia chinensis
Sed0008841 Sechium edule
Sed0016091 Sechium edule
SEGI_06461 Sequoiadendron giganteum
SGA_v2.0_scaffold5G03060 Striga asiatica
SMO195G0042 Selaginella moellendorffii
SMO367G0414 Selaginella moellendorffii
Solyc01g096380.1 Solanum lycopersicum
Sopen00g010520 Solanum pennellii
Sp1g01110 Schrenkiella parvula
TAR375G0623 Trochodendron aralioides
THA.LOC104801356 Tarenaya hassleriana
Thecc.01G335500 Theobroma cacao
Thhalv10008287m.g Eutrema salsugineum
TPR.G14294 Trifolium pratense
TPR.G25260 Trifolium pratense
TWI14G1398 Tripterygium wilfordii
unitig_21.g20086 Utricularia gibba
unitig_21.g20129 Utricularia gibba
unitig_21.g20130 Utricularia gibba
unitig_52.g17562 Utricularia gibba
unitig_52.g17564 Utricularia gibba
unitig_744.g24581 Utricularia gibba
unitig_744.g24591 Utricularia gibba
unitig_744.g24593 Utricularia gibba
vmacro04295 Vaccinium macrocarpon
VMungo0331G1846 Vigna mungo
Zm00001eb102910 Zea mays
Zm00001eb102940 Zea mays

User provided reference genes

Program Settings