Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p36220 Brassica napus
A05p39800 Brassica napus
Aa31LG3G1670 Aethionema arabicum
Aa31sc80G40 Aethionema arabicum
Aa31sc80G50 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2745 Anthoceros agrestis
Actinidia12433 Actinidia chinensis
Ah.10g030320 Amaranthus hybridus
AL3G20290 Arabidopsis lyrata
Aqoxy1G00010 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EHSJ8W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PAXQ04 Arachis hypogaea
AT3G09180 Arabidopsis thaliana
ATR0068G118 Amborella trichopoda
Atru.chr8.1369 Acer truncatum
Atru.chr9.699 Acer truncatum
Atru.chr9.700 Acer truncatum
AUR62036522 Chenopodium quinoa
AUR62042262 Chenopodium quinoa
BcaB04g18552 Brassica carinata
BcaC01g06891 Brassica carinata
BcaC05g29638 Brassica carinata
BolC3t16654H Brassica oleracea
BolC5t34536H Brassica oleracea
BraA03t12793Z Brassica rapa
BraA05t22764Z Brassica rapa
C03p43860 Brassica napus
C05p58840 Brassica napus
CAN.G219.4 Capsicum annuum
CARHR083520 Cardamine hirsuta
Carub.0003s0830 Capsella rubella
Ca_25808_v3 Cicer arietinum L.
CBR_g10855 Chara braunii
Cc11_g05910 Coffea canephora
CDE02G2672 Ceratophyllum demersum
CDE04G0639 Ceratophyllum demersum
Cfa020027 Carpinus fangiana
Ciclev10011749m.g Citrus clementina
CiPaw.10G017200 Carya illinoinensis
ClCG10G018360 Citrullus lanatus
COL.COLO4_29579 Corchorus olitorius
Cpa.g.sc35.59 Carica papaya
CsaV3_3G037930 Cucumis sativus L.
CSS0000115 Camellia sinensis var. sinensis
CSS0032108 Camellia sinensis var. sinensis
DCAR_026818 Daucus carota
Duzib093G2092 Durio zibethinus
ECA234G1824 Erigeron canadensis
EL10Ac9g21147 Beta vulgaris
Eucgr.K02619 Eucalyptus grandis
FAN02G1987 Fragaria x ananassa
FAN05G0385 Fragaria x ananassa
FAN05G1366 Fragaria x ananassa
FAN05G3301 Fragaria x ananassa
FAN05G3684 Fragaria x ananassa
FAN09G4751 Fragaria x ananassa
FAN14G3222 Fragaria x ananassa
FvH4_6g20290 Fragaria vesca
Glyma.03G201900 Glycine max
Glyma.19G026300 Glycine max
Gohir.A01G201600 Gossypium hirsutum
Gohir.A11G262000 Gossypium hirsutum
Gohir.D01G191500 Gossypium hirsutum
Gorai.002G235400 Gossypium raimondii
GSVIVG01029940001 Vitis vinifera
HanXRQChr16g0527301 Helianthus annuus
Haze_20187 Corylus avellana
Hma1.2p1_1525F.1_g288960 Hydrangea macrophylla
Hma1.2p1_1525F.1_g288970 Hydrangea macrophylla
Hma1.2p1_1525F.1_g288980 Hydrangea macrophylla
HPP92_000036 Vanilla planifolia
HPP92_001347 Vanilla planifolia
HPP92_001371 Vanilla planifolia
HPP92_001441 Vanilla planifolia
HPP92_010136 Vanilla planifolia
Hund10710 Selenicereus undatus
Lalb_Chr20g0111381 Lupinus albus
Lj1g0008745 Lotus japonicus
Lj3A860G48 Lonicera japonica
Lsat_1_v5_gn_4_22820 Lactuca sativa
Manes.08G033200 Manihot esculenta
Mapoly0090s0009 Marchantia polymorpha
MBI19_g09306_MAGBIO Magnolia biondii
MD14G1038600 Malus domestica
Medtr7g106200 Medicago truncatula
MELO3C009537.2 Cucumis melo
Migut.E00525 Erythranthe guttata
MSTRG.13644 Avicennia marina
Nitab4.5_0005476g0010 Nicotiana tabacum
Nitab4.5_0007165g0010 Nicotiana tabacum
Nn2g14624 Nelumbo nucifera
Nn2g14691 Nelumbo nucifera
Os01g0263500 Oryza sativa ssp. japonica
Peaxi162Scf00684g00584 Petunia axillaris
Peaxi162Scf00684g00585 Petunia axillaris
Peaxi162Scf01139g00002 Petunia axillaris
PGR142G3547 Punica granatum
PGSC0003DMG400006864 Solanum tuberosum
Phvul.001G195400 Phaseolus vulgaris
Potri.016G070700 Populus trichocarpa
Pp3c15_4850 Physcomitrium patens
Prupe.7G094800 Prunus persica
Psat3g029200 Pisum sativum
PSO339G5192 Papaver somniferum
PSO384G1009 Papaver somniferum
QL07p036776 Quercus lobata
RcHm_v2.0_Chr1g0331111 Rosa chinensis
RcHm_v2.0_Chr1g0331121 Rosa chinensis
RcHm_v2.0_Chr3g0475881 Rosa chinensis
Rhsim09G0086500 Rhododendron simsii
Sabra16G0070800 Salix brachista
Sabra16G0073000 Salix brachista
SalBow2G2452 Salvia bowleyana
Sc07g0007600 Simmondsia chinensis
Sed0021278 Sechium edule
SEGI_07863 Sequoiadendron giganteum
SEGI_21584 Sequoiadendron giganteum
SGA_v2.0_scaffold65G22109 Striga asiatica
Solyc01g087230.3 Solanum lycopersicum
Sopen01g034280 Solanum pennellii
Sp3g07480 Schrenkiella parvula
TAR633G0738 Trochodendron aralioides
TAR633G1840 Trochodendron aralioides
TAR633G2239 Trochodendron aralioides
THA.LOC104816617 Tarenaya hassleriana
Thecc.05G104100 Theobroma cacao
Thhalv10020833m.g Eutrema salsugineum
TPR.G14083 Trifolium pratense
TPR.G35563 Trifolium pratense
unitig_52.g17290 Utricularia gibba
VMungo1383G1945 Vigna mungo
Zm00001eb156320 Zea mays
Zm00001eb348930 Zea mays

User provided reference genes

Program Settings