Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p50110 Brassica napus
Aa31LG10G12080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2192 Anthoceros agrestis
Actinidia09292 Actinidia chinensis
Actinidia39186 Actinidia chinensis
Actinidia39187 Actinidia chinensis
Actinidia39189 Actinidia chinensis
Ah.13g076700 Amaranthus hybridus
AL5G38660 Arabidopsis lyrata
Aqoxy7G02967 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.324ZN3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.68N1MV Arachis hypogaea
AT3G57170 Arabidopsis thaliana
ATR0580G208 Amborella trichopoda
Atru.chr11.2650 Acer truncatum
AUR62026144 Chenopodium quinoa
AUR62030390 Chenopodium quinoa
BcaB05g24338 Brassica carinata
BcaC02g09903 Brassica carinata
BcaC07g40040 Brassica carinata
BcaC07g40068 Brassica carinata
BolC4t25089H Brassica oleracea
BolC8t50863H Brassica oleracea
BolC8t50864H Brassica oleracea
BraA09t40462Z Brassica rapa
C04p35350 Brassica napus
C08p32480 Brassica napus
CAN.G1237.25 Capsicum annuum
CANSAT80G2523 Cannabis sativa
CANSAT80G2643 Cannabis sativa
CARHR119890 Cardamine hirsuta
Carub.0005s2399 Capsella rubella
Ca_08420_v3 Cicer arietinum L.
Cc06_g18470 Coffea canephora
CDE08G1332 Ceratophyllum demersum
Cfa016743 Carpinus fangiana
Cfa022822 Carpinus fangiana
Ciclev10013765m.g Citrus clementina
Ciclev10025261m.g Citrus clementina
Ciclev10031083m.g Citrus clementina
CiPaw.09G043200 Carya illinoinensis
ClCG04G004100 Citrullus lanatus
COL.COLO4_20863 Corchorus olitorius
Cpa.g.sc66.72 Carica papaya
Cpa.g.sc66.74 Carica papaya
CsaV3_4G022060 Cucumis sativus L.
CSS0027694 Camellia sinensis var. sinensis
DCAR_002883 Daucus carota
Dinv14832 Davidia involucrata
Duzib151G0628 Durio zibethinus
Duzib212G0478 Durio zibethinus
ECA246G3700 Erigeron canadensis
EL10Ac3g07174 Beta vulgaris
Eucgr.A02290 Eucalyptus grandis
FAN02G2450 Fragaria x ananassa
FAN02G2483 Fragaria x ananassa
FAN05G1661 Fragaria x ananassa
FAN05G3805 Fragaria x ananassa
FAN14G5310 Fragaria x ananassa
FvH4_6g24900 Fragaria vesca
Glyma.03G131800 Glycine max
Glyma.18G212600 Glycine max
Glyma.19G133702 Glycine max
Gohir.A09G201700 Gossypium hirsutum
Gohir.D09G195600 Gossypium hirsutum
Gorai.006G219000 Gossypium raimondii
GSVIVG01033562001 Vitis vinifera
HanXRQChr17g0536551 Helianthus annuus
Haze_19761 Corylus avellana
Hma1.2p1_0275F.1_g110840 Hydrangea macrophylla
HPP92_010949 Vanilla planifolia
Hund19119 Selenicereus undatus
Lalb_Chr20g0110281 Lupinus albus
Lj1g0021626 Lotus japonicus
Lj5A499T12 Lonicera japonica
Lj5C499G2 Lonicera japonica
Lsat_1_v5_gn_3_23040 Lactuca sativa
Manes.09G010000 Manihot esculenta
Mapoly0019s0088 Marchantia polymorpha
MBI16_g31793_MAGBIO Magnolia biondii
MCO14G364 Micromonas commoda
MD07G1151500 Malus domestica
MD07G1151600 Malus domestica
MD12G1089200 Malus domestica
MD14G1081800 Malus domestica
Medtr7g090600 Medicago truncatula
MELO3C014212.2 Cucumis melo
Migut.K00113 Erythranthe guttata
Nitab4.5_0001618g0090 Nicotiana tabacum
Nitab4.5_0008674g0030 Nicotiana tabacum
Nn2g15043 Nelumbo nucifera
Nn7g36464 Nelumbo nucifera
Oeu015292.1 Olea europaea
Os05g0290300 Oryza sativa ssp. japonica
Peaxi162Scf00130g01129 Petunia axillaris
PGR031G3404 Punica granatum
PGSC0003DMG402007625 Solanum tuberosum
Phvul.001G127800 Phaseolus vulgaris
Potri.006G044500 Populus trichocarpa
Pp3c24_1230 Physcomitrium patens
Prupe.4G274500 Prunus persica
Prupe.5G000500 Prunus persica
Psat3g075960 Pisum sativum
PSO063G0854 Papaver somniferum
PSO170G1429 Papaver somniferum
QL07p004892 Quercus lobata
QL07p005099 Quercus lobata
RcHm_v2.0_Chr2g0124601 Rosa chinensis
Rhsim03G0031400 Rhododendron simsii
Sabra06G0030700 Salix brachista
SalBow1G2481 Salvia bowleyana
SalBow4G2335 Salvia bowleyana
Sc19g0008430 Simmondsia chinensis
Sed0000553 Sechium edule
SEGI_09087 Sequoiadendron giganteum
SGA_v2.0_scaffold94G28504 Striga asiatica
SMO367G0314 Selaginella moellendorffii
Solyc04g017700.4 Solanum lycopersicum
Sopen04g008780 Solanum pennellii
Sp5g05400 Schrenkiella parvula
TAR633G2073 Trochodendron aralioides
THA.LOC104824423 Tarenaya hassleriana
Thecc.04G215900 Theobroma cacao
Thhalv10005871m.g Eutrema salsugineum
TPR.G32752 Trifolium pratense
TWI53G1500 Tripterygium wilfordii
TWI74G1459 Tripterygium wilfordii
unitig_748.g7229 Utricularia gibba
vmacro20338 Vaccinium macrocarpon
vmacro21952 Vaccinium macrocarpon
VMungo1383G0485 Vigna mungo
VMungo1383G2003 Vigna mungo
Zm00001eb364590 Zea mays

User provided reference genes

Program Settings