Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p08710 Brassica napus
A10p14440 Brassica napus
Aa31LG3G13020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis
Actinidia02494 Actinidia chinensis
Ah.14g085350 Amaranthus hybridus
AL8G33040 Arabidopsis lyrata
Aqoxy7G02888 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea
AT5G57120 Arabidopsis thaliana
ATR1098G092 Amborella trichopoda
Atru.BG.17.p Acer truncatum
Atru.chr7.926 Acer truncatum
AUR62027422 Chenopodium quinoa
AUR62031274 Chenopodium quinoa
BcaB05g22318 Brassica carinata
BcaB08g36002 Brassica carinata
BcaC03g14182 Brassica carinata
BcaC04g20011 Brassica carinata
BolC2t07586H Brassica oleracea
BolC9t57729H Brassica oleracea
BraA02t05941Z Brassica rapa
BraA10t43535Z Brassica rapa
C02p14590 Brassica napus
C09p48820 Brassica napus
CAN.G403.1 Capsicum annuum
CANSAT01G0113 Cannabis sativa
CARHR270890 Cardamine hirsuta
Carub.0008s1762 Capsella rubella
Ca_21262_v3 Cicer arietinum L.
Cc03_g15250 Coffea canephora
CDE02G0471 Ceratophyllum demersum
CDE05G3513 Ceratophyllum demersum
Cfa013466 Carpinus fangiana
Ciclev10008727m.g Citrus clementina
CiPaw.07G198700 Carya illinoinensis
CiPaw.08G031700 Carya illinoinensis
ClCG06G013720 Citrullus lanatus
COL.COLO4_08570 Corchorus olitorius
Cpa.g.c33129.1 Carica papaya
Cpa.g.sc115.65 Carica papaya
Cre01.g055400 Chlamydomonas reinhardtii
CsaV3_3G012070 Cucumis sativus L.
CSS0049336 Camellia sinensis var. sinensis
CSS0049604 Camellia sinensis var. sinensis
DCAR_018014 Daucus carota
DCAR_029041 Daucus carota
Dinv25461 Davidia involucrata
Dinv41195 Davidia involucrata
Duzib170G1164 Durio zibethinus
ECA234G0353 Erigeron canadensis
ECA240G0208 Erigeron canadensis
EL10Ac8g19296 Beta vulgaris
Eucgr.C02214 Eucalyptus grandis
FAN07G1770 Fragaria x ananassa
FAN12G2329 Fragaria x ananassa
FAN17G2561 Fragaria x ananassa
FvH4_4g06950 Fragaria vesca
Glyma.13G101600 Glycine max
Glyma.17G058000 Glycine max
Gohir.A05G408300 Gossypium hirsutum
Gohir.D04G007200 Gossypium hirsutum
Gorai.012G008900 Gossypium raimondii
GSVIVG01029286001 Vitis vinifera
HanXRQChr03g0065401 Helianthus annuus
HanXRQChr10g0308981 Helianthus annuus
Haze_22044 Corylus avellana
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla
HPP92_018699 Vanilla planifolia
Hund24378 Selenicereus undatus
Lalb_Chr13g0299851 Lupinus albus
Lj4g0027857 Lotus japonicus
Lsat_1_v5_gn_5_83860 Lactuca sativa
Lsat_1_v5_gn_7_55781 Lactuca sativa
Manes.06G017800 Manihot esculenta
Mapoly0009s0141 Marchantia polymorpha
MBI14_g15781_MAGBIO Magnolia biondii
MBI14_g15782_MAGBIO Magnolia biondii
MBI18_g10586_MAGBIO Magnolia biondii
MCO09G065 Micromonas commoda
MD13G1240600 Malus domestica
MD16G1246300 Malus domestica
Medtr4g127160 Medicago truncatula
MELO3C006422.2 Cucumis melo
Migut.L01872 Erythranthe guttata
MSTRG.26556 Avicennia marina
Nitab4.5_0000028g0410 Nicotiana tabacum
Nitab4.5_0004916g0020 Nicotiana tabacum
Nn8g40670 Nelumbo nucifera
Oeu003868.2 Olea europaea
Oeu063100.1 Olea europaea
Os12g0613500 Oryza sativa ssp. japonica
Peaxi162Scf00046g00417 Petunia axillaris
PGR044G2166 Punica granatum
PGSC0003DMG400019897 Solanum tuberosum
Phvul.003G140452 Phaseolus vulgaris
Potri.006G073100 Populus trichocarpa
Potri.018G140200 Populus trichocarpa
Pp3c3_34440 Physcomitrium patens
Pp3c3_34441 Physcomitrium patens
Prupe.1G073000 Prunus persica
Psat4g014480 Pisum sativum
PSO063G0609 Papaver somniferum
PSO170G0082 Papaver somniferum
QL07p048247 Quercus lobata
RcHm_v2.0_Chr4g0398981 Rosa chinensis
Rhsim01G0114500 Rhododendron simsii
Sabra06G0054500 Salix brachista
Sabra18G0114500 Salix brachista
Sed0014693 Sechium edule
Sed0024384 Sechium edule
SEGI_10172 Sequoiadendron giganteum
SEGI_20539 Sequoiadendron giganteum
SEGI_22268 Sequoiadendron giganteum
SGA_v2.0_scaffold392G50652 Striga asiatica
SGA_v2.0_scaffold41G15805 Striga asiatica
Solyc07g008330.3 Solanum lycopersicum
Sopen07g004220 Solanum pennellii
Sp6g18850 Schrenkiella parvula
TAR637G0001 Trochodendron aralioides
THA.LOC104813501 Tarenaya hassleriana
THA.LOC104817770 Tarenaya hassleriana
Thecc.09G191500 Theobroma cacao
Thhalv10013871m.g Eutrema salsugineum
TPR.G5393 Trifolium pratense
TWI32G1283 Tripterygium wilfordii
TWI34G1560 Tripterygium wilfordii
unitig_8.g3553 Utricularia gibba
vmacro20806 Vaccinium macrocarpon
VMungo1215G0729 Vigna mungo
Zm00001eb136110 Zea mays
Zm00001eb172010 Zea mays

User provided reference genes

Program Settings